| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1197 |
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| Symbol | dnaE |
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| ID | 4883233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | + |
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| Start bp | 1174382 |
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| End bp | 1178206 |
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| Gene Length | 3825 bp |
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| Protein Length | 1274 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640127125 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001058246 |
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| Protein GI | 126440764 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGATG CGTTCGCGGC CGCCGGCCAC GCCATCTCGA AAAGGGGCGA AACGAGGGCG
CGAAGCGCGG ATGCGGACGT TGCCGCGTCG CCGCGAACGG GGCGCCGGCG GCCGGAACCC
GTGATCGAAC CCGACGATCC GAATCCGCGA TCGGCGCCGG CCACGCGCGC CGCGGCGAAC
TGCCGTCGTG CGCGGCTTCG CGGCCCGCCG CCCGCGCCGG TCTTGGCCCG ACGGCCAACG
CGGCGATTTT TTGCCCGCCG CGAACGGTAT CGGGTTCCCG GGCCGGCTAC AATAGCGCCC
ATGTCAGATC CCCGTTTCGT TCACCTCCGC GTCCACTCCG AATTCTCGAT TGCCGACGGC
ATCGTGCGTC TCGACGATAT CGTCAAGTCG GCGGCCGAAG ACGGTCAGGG CGCGCTTGCA
CTGACCGACC TCGGCAACGC GTTCGGTCTC GTCCGTTTCT ACAAGGAAGC CCGCGATGCG
GGCATCAAGC CGATCGCCGG CTGCGATGTC TGGATCACCA ACCACGACGA TCGCGACAAG
CCGTCGCGGC TGCTGCTGCT CGTCAAGGAC AAGCGCGGCT ACCTGAACCT CTGCGAGCTG
CTGTCGAAGG CGTGGCTCAC GAACCAATAC CGCGGCCGCG CGGAGCTCGA CGCGAGCTGG
CTCGAAGGCG AGCTCGCCGA AGGGCTGCTC GCGCTGTCAG GCGCGCAGCA GGGCGACATC
GGCCTCGCGC TCGCGGCGGG CAACGAGGCG GCCGCGCGCC GCCACGCGCA GCGCTGGGCG
CGGGTGTTCC CGGGCGGTTT CTATATCGAA TTGCAGCGCT ACGGCCAGCC GGGCGCGGAA
GCGTACATCC AGCAGGCGGT GGCGATCGCG GCGGAGCTGA AGCTGCCCGT CGTCGCGACG
CATCCGCTGC AGTACATGAC GGCCGACGAT TTCACCGCGC ACGAGGCGCG CGTGTGCATC
TCGGAAGGCG ACATCCTCGC GAATCCGCGC CGCCAGAAAC GCTTCACGAC CGAGCAGTTC
TTCCGCACGC AGGGCGACAT GGCCGCGCTG TTCGCCGATC TGCCCTCGGC GCTCGCGAAC
ACGGTCGAGA TCGCCAAGCG CTGCAACCTG ACGCTCGAGC TCGGCAAGCC GAAGCTGCCG
CGGTTCCCAA CGCCCGACGG CATGTCGCTC GACGACTACC TCGTGCAGTT GTCGCAGGAA
GGGCTCGACA AACGCCTCGT GCAGCTCTAC CCGGACGAGG CCGAGCGCGA AGCGCAACGC
GGGAAGTACA ACCAGCGTCT CGATTTCGAG TGCGGCACGA TCAAGAAGAT GGGCTTTCCG
GGCTACTTCC TGATCGTCGC GGACTTCATC AACTGGGCGA AGAACAACGG CGTGCCGGTG
GGCCCCGGGC GGGGCTCGGG CGCGGGCTCG CTCGTCGCGT ATTCGCTCGG CATCACCGAC
CTCGATCCGC TGCGCTACAA CCTGCTGTTC GAGCGCTTCC TGAACCCGGA GCGGGTGTCG
ATGCCCGACT TCGACATCGA CTTCTGCCAG CACGGCCGCG ACCGCGTGAT CCAGTACGTG
AAGGAGAAGT ACGGCGCGGA CGCGGTGTCG CAGATCGCCA CCTTCGGCAC GATGGCCGCG
AAGGCGGCCG TGCGGGATAT CGGCCGGGTG CTCGATCTCG GCTACATGTT CACCGACGGC
GTCGCGAAGC TGATCCCGTT CAAGCCGGGC AAGCACGTGA CGATCGCCGA CGCGATGAAG
GAAGAGCCGC TCCTGCAGGA GCGCTACGAC AACGAGGACG AAGTCCATCA GTTGCTCGAT
CTCGCGCAGC GCGTGGAGGG CCTCACGCGC AACGTCGGGA TGCACGCGGG CGGCGTGCTG
ATCGCGCCCG GCAAGCTGAC CGATTTCTGC CCCCTCTACA CGCAGGGCGA CGAAGGCGGC
GTCGTCAGCC AGTACGACAA GGACGACGTC GAAGCCGTCG GCCTCGTGAA GTTCGACTTT
CTCGGCCTCA CGACGCTCAC GATTCTCGAC TGGGCCGAGC GCTACATTCG CCGTCTCGAT
CCGAGCAAGG AGAACTGGTC GCTCGCGCAG GTGCCGCTCG ACGATCCGAC GTCGTTCCAG
ATCCTCAAGA AGGCCAACAC GGTCGCCGTG TTCCAGCTGG AAAGCCGCGG CATGCAGGGG
ATGCTGAAGG ACGCGCAGCC CGACCGCTTC GAGGACATCA TCGCGCTCGT GTCGTTGTAC
CGGCCGGGCC CGATGGACCT GATTCCGAGC TTCTGCGCGC GCAAGCACGG GCGCGAGAAG
GTCGACTATC CGGATCCGCG CGTCGAGCCT GTCCTGAAAG AGACCTACGG GATCATGGTC
TATCAGGAGC AGGTGATGCA GATGGCGCAG ATCATCGGCG GCTATTCGCT CGGCGGCGCG
GACTTGCTGC GTCGCGCGAT GGGCAAGAAG AAGCCCGAGG AGATGGCCAA GCATCGCGAG
ATCTTCGCCG AGGGCGCCGC GAAGAACGGC CTCACGCGCG AGAAGTCCGA CGAGATCTTC
GACCTGATGG AGAAGTTCGC GGGCTACGGC TTCAACAAGT CGCACGCGGC CGCGTACGCG
CTGCTCGCGT ATTACACCGC GTGGCTGAAG GCGCACCATC CGGCCGAATT CATGGCGGCC
AACATGACGC TCGCGATGGA CGACACCGAC AAGGTGAAGA TCCTGTTCGA CGATTGCCTC
GTCAACGGCC TCGCCGTGCT GCCGCCCGAC ATCAACCGTT CGAACTATCG CTTCGAGCCC
GTCGCCGAGG CCGACGGCAA ACGCTCGCGC ACGATCCGCT ACGGCCTCGG CGCGATCAAG
GGCAGCGGCC AGAACGCGAT CGAGGAGATC CTGCGCGCAC GCGAGGAAAA GCCGTTCGCC
GATCTGTTCG ATTTCTGCGA GCGGATCGAC CGCCGCGTCG TGAACCGCCG CACGATCGAA
GCGATGATTC GCGCGGGCGC ATTCGATTCG CTGCACGAGA ATCGCGCGCA GTTGCTCGCA
TCGGTGCCGC TCGCGATGGA GGCCGCCGAG CAGGCGGCCG CGAACGCGCT GCAGGCGGGC
CTGTTCGACA TCGGCGGCGT GCCCGCGCAC CAGCACGCGC TCGTCGACGA GCCGGCGTGG
GACGACAAGC GTCGCCTGCA GGAAGAGAAG GGCGCGCTCG GCTTCTACCT GTCCGGCCAC
CTGTTCGACG CGTATCGCGA CGAGGTGCGC CGTTTCGTGC GCCAGAAGCT CGGCGAGCTG
AAGGAAGGGC GCGACAAGGT GGTGGCCGGC GTGATCGCGT CGTTGCGCAC GCAGATGACG
CAGCGCGGCA AGATGGTGAT CGCGTTGCTC GACGACGGCA CCGGCCAGTG CGAAGTCACC
GTGTTCAACG AGCAGTTCGA CGCGAACCGC GCGCTCTTCA AGGAGGACGA GCTGCTGATC
GTCCAGGGGC AGGCGCGCAA CGACGCGTTC ACGGGCGGAA TTCGCTTCAC CGCCGAGTCG
GTGATGGACC TCGAGCGTGC GCGCAGCCGC TACGCGCAGG CGGTGCGGAT GACGATGAAC
GGCAACGCGG ACGCGGCGGC GCTGCGCCGC GTGCTGGAAG CGCACGTCGC GAAACCCGAC
GAGACGCCGC CCGCCGCGGC GCCGGCGCCG CGCGGCGGCC GCGACGGCGG GCGGCGGGCG
CAGGCGGCGA TACCGAATGG TCTCGCCGTG CGGATCGCAT ACAGCAACGC GCGTGCGCAA
GGCGAGATGC GCCTGGGCGA CGCATGGCGC GTGAAGCCGA GCGACGCGTT GCTCGCCGAT
CTGCGCGCGG CGTTCGGCGG CAGCGTCGTC GAGATCGTCT ACTGA
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| Protein sequence | MADAFAAAGH AISKRGETRA RSADADVAAS PRTGRRRPEP VIEPDDPNPR SAPATRAAAN
CRRARLRGPP PAPVLARRPT RRFFARRERY RVPGPATIAP MSDPRFVHLR VHSEFSIADG
IVRLDDIVKS AAEDGQGALA LTDLGNAFGL VRFYKEARDA GIKPIAGCDV WITNHDDRDK
PSRLLLLVKD KRGYLNLCEL LSKAWLTNQY RGRAELDASW LEGELAEGLL ALSGAQQGDI
GLALAAGNEA AARRHAQRWA RVFPGGFYIE LQRYGQPGAE AYIQQAVAIA AELKLPVVAT
HPLQYMTADD FTAHEARVCI SEGDILANPR RQKRFTTEQF FRTQGDMAAL FADLPSALAN
TVEIAKRCNL TLELGKPKLP RFPTPDGMSL DDYLVQLSQE GLDKRLVQLY PDEAEREAQR
GKYNQRLDFE CGTIKKMGFP GYFLIVADFI NWAKNNGVPV GPGRGSGAGS LVAYSLGITD
LDPLRYNLLF ERFLNPERVS MPDFDIDFCQ HGRDRVIQYV KEKYGADAVS QIATFGTMAA
KAAVRDIGRV LDLGYMFTDG VAKLIPFKPG KHVTIADAMK EEPLLQERYD NEDEVHQLLD
LAQRVEGLTR NVGMHAGGVL IAPGKLTDFC PLYTQGDEGG VVSQYDKDDV EAVGLVKFDF
LGLTTLTILD WAERYIRRLD PSKENWSLAQ VPLDDPTSFQ ILKKANTVAV FQLESRGMQG
MLKDAQPDRF EDIIALVSLY RPGPMDLIPS FCARKHGREK VDYPDPRVEP VLKETYGIMV
YQEQVMQMAQ IIGGYSLGGA DLLRRAMGKK KPEEMAKHRE IFAEGAAKNG LTREKSDEIF
DLMEKFAGYG FNKSHAAAYA LLAYYTAWLK AHHPAEFMAA NMTLAMDDTD KVKILFDDCL
VNGLAVLPPD INRSNYRFEP VAEADGKRSR TIRYGLGAIK GSGQNAIEEI LRAREEKPFA
DLFDFCERID RRVVNRRTIE AMIRAGAFDS LHENRAQLLA SVPLAMEAAE QAAANALQAG
LFDIGGVPAH QHALVDEPAW DDKRRLQEEK GALGFYLSGH LFDAYRDEVR RFVRQKLGEL
KEGRDKVVAG VIASLRTQMT QRGKMVIALL DDGTGQCEVT VFNEQFDANR ALFKEDELLI
VQGQARNDAF TGGIRFTAES VMDLERARSR YAQAVRMTMN GNADAAALRR VLEAHVAKPD
ETPPAAAPAP RGGRDGGRRA QAAIPNGLAV RIAYSNARAQ GEMRLGDAWR VKPSDALLAD
LRAAFGGSVV EIVY
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