Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1178 |
Symbol | phaZ |
ID | 4883181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 1155511 |
End bp | 1156977 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640127106 |
Product | intracellular poly[D(-)-3-hydroxybutyrate] (PHB) depolymerase |
Protein accession | YP_001058227 |
Protein GI | 126442192 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTACC AATTTCACGA ATTCCAGCGG GCGATGCTGA GCCCGCTGAC CGCCTGGGCA CAAGCCGCGT CCAAATCGTT CGCGAACCCG TCGAGTCCGC TTTCGCTCGT ACCGGGCGCG ACGCGCCTCG CGGCGGGCTA CGAACTGCTG TACCGGCTCG GCAAGGATTA CGAGAAGCCG GAGTTCGGGA TTCACCAGAT CGTCAAGGAC GGACACAACA TTCCGATCGT CGAGCAGACG ATCATCGAAA AGCCGTTCTG CCGGCTGCTG CGCTTCAAGC GCTACGCGGA CGATTCGGGC GCCGTCGGGC AACTGAAGGA CGAGCCCGTC GTGCTCGTGT GCGCGCCGCT GTCGGGCCAC CACGCCACGC TGCTGCGCGA CACGGTCCGC ACGCTGCTGC AGGACCACAA GGTCTACATC ACCGACTGGA TCGACGCGCG GATGGTGCCC GCCGAAGTCG GCTCGTTTCA TCTCGACGAC TACGTCGGCT ACATCCAGGA ATTCATCCGG CATATCGGCG CGCGCAACCT GCACGTGATC TCGGTATGCC AGCCGACCGT GCCCGTGCTC GCGGCGATCT CGCTGATGGC GAGCCGCGGC GAGGACACGC CGCTCACGAT GACGATGATG GGCGGGCCGA TCGACGCGCG CAAGAGCCCG ACGTCGGTGA ATTCGCTCGC GACCAACCGC TCGCACTCGT GGTTCGAGAA CAACGTGATC CACACGGTGC CGGCGAACTA TCCGGGCGAG GGTCGCAAGG TCTATCCGGG CTTCCTGCAG CACACGGGCT TCGTCGCGAT GAACCCGGAG CGCCACGCGC AATCGCACTG GGACTTCTAC CAGAGCCTGC TGCGCGGCGA CGAGGAAGAC GCCGAGGCAC ACCGCCGCTT CTACGACGAA TACAACGCGG TGCTCGACAT GGCGGCCGAA TACTATCTGG ACACGATCCG CATCGTGTTC CAGGAGTTCC GCCTCGCCGA GGGCACGTGG GACATCCACG GCGAGCGCGT GAAGCCGGCC GATATCCATT CGACCGCGCT GATGACGATC GAGGGCGAAC TCGACGACAT CTCGGGCAGC GGCCAGACGC ACGTCGCGCA CGAGCTGTGC ACGGGCATCG AACAGGCGCA CCGCCGCAGC CTCACCGCCG AGAAGTGCGG CCACTACGGC ATTTTCTCGG GCCGCCGCTG GCGCACGATC ATCTATCCGC AACTGCGCGA CTTCATCCGC GAGCACGCGT CGCAGCCGAA GAAGCCGACG CCGCAGGCCG GTCCCACGCC CAACTCGCCT TCCACGCCGA GCCGATCGGC ATCGGGCGGC GAAACGGCGA GCGCCGCGCC CGCGAAAGCG GCCGCGCTCA AGCTGAGCGC GAAGCGCACC GCCGCCAAAA CCCGTGCGGC GAAGCCGCCC GCCGCCAAGC GCGGCGCAAT CAAGCTCGCC GCGCCCCGCA CGCGCAAGGC CGCCTGA
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Protein sequence | MLYQFHEFQR AMLSPLTAWA QAASKSFANP SSPLSLVPGA TRLAAGYELL YRLGKDYEKP EFGIHQIVKD GHNIPIVEQT IIEKPFCRLL RFKRYADDSG AVGQLKDEPV VLVCAPLSGH HATLLRDTVR TLLQDHKVYI TDWIDARMVP AEVGSFHLDD YVGYIQEFIR HIGARNLHVI SVCQPTVPVL AAISLMASRG EDTPLTMTMM GGPIDARKSP TSVNSLATNR SHSWFENNVI HTVPANYPGE GRKVYPGFLQ HTGFVAMNPE RHAQSHWDFY QSLLRGDEED AEAHRRFYDE YNAVLDMAAE YYLDTIRIVF QEFRLAEGTW DIHGERVKPA DIHSTALMTI EGELDDISGS GQTHVAHELC TGIEQAHRRS LTAEKCGHYG IFSGRRWRTI IYPQLRDFIR EHASQPKKPT PQAGPTPNSP STPSRSASGG ETASAAPAKA AALKLSAKRT AAKTRAAKPP AAKRGAIKLA APRTRKAA
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