| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0844 |
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| Symbol | dacB |
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| ID | 4884696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | - |
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| Start bp | 821520 |
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| End bp | 823208 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640126772 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001057895 |
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| Protein GI | 126440926 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.138554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGACA TTGTAGCGCC GCCGCGCGCG GGAACGGACC TTCGGGCGAT TTCGGCGCTG
CTCGCGCGCC GTTTTCTCTA CAATGTGCGG CTTGCGCCAC GCGCGCGCCC GTTGCTCACG
TCGCCTTCCG TTCTCCCGCA TTCGTCGATG AATCACCACG CCTGCCGCAT CGCCGCCTCG
CCAAGTCCGC CCCCGCCCGC CGCCGTCCGT GCGCGGCGCA CGCTCGCGCG CGGCGCGATG
CTCGTCGCCG CGTGCGCCGC GCTCGCGTTC GCCGCGCCCG CCGACGCCCG CAGGAAACCG
AAGCCCCCCC GCTATCCGGC CGCGGTGTCG GCCGCGCGCA ACGTGCTGCC CGCCTCGGTG
CTCGTCGCGC TGCAGCGCGC GCGCGTGCCG GCGTCGAGCC TGAGCGTCGT CGTCGAGCGG
ATCGGCGATC GCACGCCCGT CGTCGCATGG AACGCGAGCC GGCCGATGCA GCCCGCCTCG
ACGATGAAGC TCGTGACCAC CTACGCGGGG CTGTCGCTGC TCGGCGCCGA CTATCGCTGG
CGTACGAGCG CGTACGCCGA CGGCGACGTC GACGAGAACG GCACGCTGCA CGGCACGCTG
TACATCAAGG GCACCGGAGA CCCGAAGCTC GTGCCGGAGG AACTGATCGA CCTCGTCAAC
AAGATCCGCC GCGCGGGAAT CGTCAACGTC GACGGCGCGC TCGTGCTCGA CAAGACCTTC
TTCGCGCCGC AGACGCGCGA CCTGCCGCCG CTCGACGACG ACGCGAGCGC CCCGTACAAC
GTCGGCCCCG ACCCGCTGCT CTACGCGTTC AAGGCGCTGT CGTTCACGGT GACGCCGACC
GACAGCGGCG CGATCGCAGT CGACGTCGTG CCGGCGCTCG CGAACCTGAA CGTCGACAAC
CGGCTCGTCG AGGGACAGGG CTCGTGCGAC GCGGCGCGCC CGACGCTCGT GACCGATGCG
AACGGCGAGC TCACCGCGTC GTTCGCGGGC GACTATCCGC CGAGCTGCGG CCCGACGACG
ACCAATCTCG CGGTGCTGAA CCATTCCACG TTCTTCGCGC GCGGCTTTCT CGCGCTGTGG
CGGCAGACGG GCGGCTCGTT CTCGGGAACG ATCGCCGAGG GCAAGGTGCC GGGCCGCGCG
CGGCCCGTTG CGTCGCACCA CGGCCCGGTG CTGTCGAGCG TCGTGCACGA CATCAACAAG
TTCAGCAACA ACGTGATGGC GCGCAACCTG TTCCTCACGA TCGGCGCGGT CGAGCACCGG
CCGCCCGCGA CGCCCGCGCA GTCGGCCGAC ACGATCCGCG CGTTCCTCGC GCACAGCGGG
CTGCCCACCG ACGGGCTCGC GCTCGAGAAC GGCTCGGGGC TGTCGCGCGA CGAGCGCGTG
AGCGCGCTCG GGCTCGCCGA CATGCTGCAG GCGGCCAACG CGAGCCCCGT CGCGCAGGCG
TTCGTCGATT CGCTGCCGAT CGCGGGCGTC GACGGCACGA TGCGGAACCG GCTGACGAAC
GCACCCGTCG GCGGCAACGC GCACATCAAG ACGGGCACGC TGCGCGACGT GCGCGCGATC
GCGGGCTACG TCGCATCGGC GGACAGCTCG AGCTATGTCG TCGTCAGCTT CATCAACGAC
GATCGCGCGT CGGCCGCGCG CGCGGCGCAC GACGCGCTGC TCGAATGGGT GTACGAAGGG
CCACGCTGA
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| Protein sequence | MADIVAPPRA GTDLRAISAL LARRFLYNVR LAPRARPLLT SPSVLPHSSM NHHACRIAAS
PSPPPPAAVR ARRTLARGAM LVAACAALAF AAPADARRKP KPPRYPAAVS AARNVLPASV
LVALQRARVP ASSLSVVVER IGDRTPVVAW NASRPMQPAS TMKLVTTYAG LSLLGADYRW
RTSAYADGDV DENGTLHGTL YIKGTGDPKL VPEELIDLVN KIRRAGIVNV DGALVLDKTF
FAPQTRDLPP LDDDASAPYN VGPDPLLYAF KALSFTVTPT DSGAIAVDVV PALANLNVDN
RLVEGQGSCD AARPTLVTDA NGELTASFAG DYPPSCGPTT TNLAVLNHST FFARGFLALW
RQTGGSFSGT IAEGKVPGRA RPVASHHGPV LSSVVHDINK FSNNVMARNL FLTIGAVEHR
PPATPAQSAD TIRAFLAHSG LPTDGLALEN GSGLSRDERV SALGLADMLQ AANASPVAQA
FVDSLPIAGV DGTMRNRLTN APVGGNAHIK TGTLRDVRAI AGYVASADSS SYVVVSFIND
DRASAARAAH DALLEWVYEG PR
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