| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0817 |
|---|
| Symbol | |
|---|
| ID | 4884295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 797993 |
|---|
| End bp | 799780 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640126745 |
|---|
| Product | O-antigen polymerase family protein |
|---|
| Protein accession | YP_001057868 |
|---|
| Protein GI | 126442240 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCTT CCTTTCTGCG TTCTCTATCG CTGATCGCGC TTGCCGTCGC CCTGATCCTG
CCGTATGCGA TCACGAACCA CACCTATCCG ATCCCGACCT TCTATTCCGA ATTCGCCGCG
TTCGCGCTGT ATTGGGTGCT CGGCGCGAGC GTCGTCCTGC TCGTGAAAGC CGAGCGCGCC
GAGCAGCCGT TCGCGGCGCC GATGGCGCTC GTCGCGCCGC TCGGGTTCGG CGCGGTATTG
CTTGCGCAGA TCGCGCTGCT GCCGCTGCGC CAGCCCTCGA TGAACTGGCT CGCGATGGGC
TACCTGCTCG GCGCGCTCGT CGCGATGCAG GCCGGATATG CGCTCGCGCG CGTGAACATG
GTCGATATGG TCGCGCGGAT GATCGCGGGC GCGACGATCG TCGGCGGCGT CGTCGCGGTC
GCCTGCCAGT TCGTGCAGCT GTTCCATCTG GAGACGACGT TCTCGCCGTT CGTCGTGTCG
TATGGCGTGA CCGTCGAGCG CCGCCCGTAC GGCAACATGG CGCAGGCCAA CCACTTGGCG
ACCTATATCG CGTTCGCGCT CGCGGGCGCG CTCTATCTCG TGCAGACGCG GCGGATGCCG
GCGCTCGCGT GGGCGGCGCT ATCGGCGCTG CTGTCGGTCG GGCTCGCGCT GACCGTGTCG
CGCGGGCCTT GGCTGCAGGT CGGCGTGATG GTGGTCGCCG GCTTCTGGAT GGCGTTCGCG
CAGGCCCGGC GCGACCCGGC GGCGAGCCGC GCGCGCGCGT GGGCGATTCC CGTCGTGCTC
GGCGTGCTGT TCGTCGCGGT CAACGTCGCG GTGCGCTGGG CCAACGTGCA CTACCATCTC
GGCCTCGCGG AATCCGCCGC GGACCGCATG CGCGACGCCG GTCAGATCGC GCCGCGCCTC
GCGCTCTGGA AGTACGGCCT CACGATGTTC CGCGAGCATC CGCTGCTCGG CGTCGGCTGG
GGCGAGTTCC CGATCCACCA GTTCGAGCTC GCGCGCCGGC TGGGCGGCGT CGAGATCGCG
AACAACTCGC ACGACATCTT CATCGATCTG CTCGCGAAAT CCGGCTTGCT CGGCCTCGGC
GTGCTGTTCG TCGCGCTCGT CGCGTGGTTC GTGCGCGCGC TGCGCGTGCC GCATACCGAG
AGCCGCGTGT TCGGTTTCGC GCTCGTCGGC ATCGTGCTGA TGCATGCGCT CGTCGAATAT
CCGCAGCAGT ACACGTTCTT CCTGCTGCCC GTGATGTTCG TGATCGGCCT GCTCGAGACG
AAGCCGCTAC GCGCGCTGCC CGGCCGCGCG ACGTTCGTGC TGTTCGCGGC GCTATCGGTG
GCGGGGCTTG CGTCGCTGTA TCCGATCCTG CGCGACTACC AGCGCGCCGA GGTGCTGTAT
TACGGCACGA ATCCGGCCGA GCAATACCGC GCGCACCCGT CGTTCCTGTT CGGCGCCTGG
GGGGATTACG GCGCGGCGAC GCTGCTCGCG ATCTCGCGCG AGAACTTGCC GGCGAAGCTC
GCCGCCCACG AAAGCGCGAT CGCGCTGCTG CCGGGCGAGA CGGTGCTGCG CCGCTACGCG
GTGCTGCAGG CGCTCGACGG CCGCGAGACC GACGCGCTCG ATACGATCGA GCGTTTGCGC
GTGTTCGCGG AGGAGCTGCA CGACTGGCCG GTGCAGCTCG CCGCGCTGTA CAAGCTGCTC
GACGACCAGC CGTCGCTGAA GTCGTTCAAG GCGGCGCTCG TCGCGAAATA CGGGACGCCC
GCGGCGAACC TGTCGGCGGA CGACGAGGAA GACGACGGCG ACGATTGA
|
|---|
| Protein sequence | MPSSFLRSLS LIALAVALIL PYAITNHTYP IPTFYSEFAA FALYWVLGAS VVLLVKAERA
EQPFAAPMAL VAPLGFGAVL LAQIALLPLR QPSMNWLAMG YLLGALVAMQ AGYALARVNM
VDMVARMIAG ATIVGGVVAV ACQFVQLFHL ETTFSPFVVS YGVTVERRPY GNMAQANHLA
TYIAFALAGA LYLVQTRRMP ALAWAALSAL LSVGLALTVS RGPWLQVGVM VVAGFWMAFA
QARRDPAASR ARAWAIPVVL GVLFVAVNVA VRWANVHYHL GLAESAADRM RDAGQIAPRL
ALWKYGLTMF REHPLLGVGW GEFPIHQFEL ARRLGGVEIA NNSHDIFIDL LAKSGLLGLG
VLFVALVAWF VRALRVPHTE SRVFGFALVG IVLMHALVEY PQQYTFFLLP VMFVIGLLET
KPLRALPGRA TFVLFAALSV AGLASLYPIL RDYQRAEVLY YGTNPAEQYR AHPSFLFGAW
GDYGAATLLA ISRENLPAKL AAHESAIALL PGETVLRRYA VLQALDGRET DALDTIERLR
VFAEELHDWP VQLAALYKLL DDQPSLKSFK AALVAKYGTP AANLSADDEE DDGDD
|
|---|
| |