Gene BURPS668_0724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_0724 
SymbolglpF 
ID4883497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp702217 
End bp702933 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID640126652 
Productglycerol uptake facilitator protein 
Protein accessionYP_001057776 
Protein GI126440383 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.122714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACCAT ACATCGCGGA GTTCATCGGC ACGGCGCTGC TCGTGCTGCT CGGCAACGGC 
GCCGTTGCGA ACGTGCTGCT CGCGAAAACC AAAGGCAAGG GCGCGGACCT CATCGTCATC
GTGATGGGTT GGGCGATGGC GGTATTCGTC GCGGTCTACG TAACCGCATC GTTCTCCGGC
GCGCACCTGA ATCCGATCGT CACGATCAGC CTCGCGCTCG CGGGCAAGTT CGCATGGGCG
AAGGTGGGCG GCTACGTCGC GTCGCAGATG CTCGGCGGCA TGGCGGGCGC GTTCCTCGTG
TGGCTCGCGT ATCGCCAGCA CTTCGCGAAG GAGGCCGATC CCGATCTGAA GCTCGCCGTG
TTCTGCACCG CGCCCGCGAT CCGCAGCGTC ACGCACAACG TGCTGACGGA GGCGATCTGC
ACTTTCGTGC TGATCCTCGG CGTGCTGTAT CTCGCGTCGC CGCAAGTCGG CCTGGGCGCG
CTCGACGCGC TGCCCGTCGG CCTGCTCGTG CTCGGCATCG GCATCTCGCT CGGCGGCCCG
ACGGGCTACG CGATGAGCCC CGCGCGCGAC CTGTCGCCGC GCATCATGCA CGCGCTGCTG
CCGATTCCCG GCAAGCGCGA CAGCGACTGG CGCTATGCAT GGGTGCCGGT GCTCGGGCCG
CTCGTCGGCG GCGTGCTCGC GGCGAACCTG TACCTGTATC TGCATACGAC GCACTGA
 
Protein sequence
MSPYIAEFIG TALLVLLGNG AVANVLLAKT KGKGADLIVI VMGWAMAVFV AVYVTASFSG 
AHLNPIVTIS LALAGKFAWA KVGGYVASQM LGGMAGAFLV WLAYRQHFAK EADPDLKLAV
FCTAPAIRSV THNVLTEAIC TFVLILGVLY LASPQVGLGA LDALPVGLLV LGIGISLGGP
TGYAMSPARD LSPRIMHALL PIPGKRDSDW RYAWVPVLGP LVGGVLAANL YLYLHTTH