Gene BURPS668_0694 details

Gene Information

• Locus tag: BURPS668_0694
• Symbol: pdxA
• ID: 4883281
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: +
• Start bp: 671202
• End bp: 672266
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640126622
• Product: 4-hydroxythreonine-4-phosphate dehydrogenase
• Protein accession: YP_001057746
• Protein GI: 126440158
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1995] Pyridoxal phosphate biosynthesis protein
• TIGRFAM ID: [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGACC GTCCGCAGCC GCTGCGCATC GCGATCACGA CCGGCGAGCC GGCCGGCGTC 
GGCCCCGAGC TGACGGCCCG CGCGCTCGCC GACGCGGCGA CGCGCTGGCC GGACGCGCGC 
TTCACGGTGC TCGGCGACGC GAGCCTGATC GCCGCGCGCG CGGCGGCGGT CGGCCTCGAT 
TGGACGCGCA TGACGGCAGC GGGGGGCGGT GCGCATGTCG CGGACGCGCA CGTCGCCAAC 
GCGCATGTCG CCAACGCGCA TGTCGCCAAC GCGCATGTCG CCGTCGCGCA TCGCGCGCTT 
GCCGCGCCCG CCGAGGCGGG CAAGCTGAAT CCGGCGAACG GGCGCTACGT GCTCGATCTG 
CTCGATGCGG CGATCGACGG CGCGCTCGCC GGCGAATACG ACGCGATCGT CACCGCGCCG 
CTGCAAAAGA GCACGATCAA CGACGCCGGC GTGCCTTTTA CCGGCCACAC CGAATATCTC 
GCCGAGCGCA CGCGCACGCC GCACGTCGTG ATGATGCTCG CCGGCACGGG CGAGCGGCCG 
CTGCGCGTCG CGCTCGCGAC GACGCACCTG CCGCTCAGGG ATGTGTCGGC CGCGCTGACG 
ATCGACGGTC TCGCCGATAC GCTGTCGATC ATCGATCGCG ATCTGCGCGG CAGCTTCGGC 
CTTGCCGCGC CGCGCATCCT CGTCACGGGG CTCAATCCCC ATGCGGGCGA GCACGGCTAT 
CTCGGCCGCG AGGAAATCGA CGTGATCGAG CCGGCGCTCG AACGCGCGCG GGCGGCGGGC 
ATCGACGCGC GCGGGCCGTA CCCGGCCGAT ACGCTGTTCC AGCCGCGTTA CCTCGAGCAC 
GCGGATTGCG TGCTCGCGAT GTTTCATGAT CAGGGGCTGC CGGTCCTCAA GTACGCGACA 
TTCGGCGAAG GCATCAACGT CACGCTCGGC CTGCCGATCA TCCGCACGTC GGTCGATCAC 
GGCACCGCGC TCGATCTCGC CGGCACCGGC CGGGCCGATC CGGGCAGCCT CGTCGCCGCG 
ATCGACACCG CCGTGACGAT GGCGCGCCAT CGGCGCGCGG GCTGA 

 

Protein sequence

MSDRPQPLRI AITTGEPAGV GPELTARALA DAATRWPDAR FTVLGDASLI AARAAAVGLD 
WTRMTAAGGG AHVADAHVAN AHVANAHVAN AHVAVAHRAL AAPAEAGKLN PANGRYVLDL 
LDAAIDGALA GEYDAIVTAP LQKSTINDAG VPFTGHTEYL AERTRTPHVV MMLAGTGERP 
LRVALATTHL PLRDVSAALT IDGLADTLSI IDRDLRGSFG LAAPRILVTG LNPHAGEHGY 
LGREEIDVIE PALERARAAG IDARGPYPAD TLFQPRYLEH ADCVLAMFHD QGLPVLKYAT 
FGEGINVTLG LPIIRTSVDH GTALDLAGTG RADPGSLVAA IDTAVTMARH RRAG