Gene BURPS668_0481 details

Gene Information

• Locus tag: BURPS668_0481
• Symbol: secB
• ID: 4885030
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: +
• Start bp: 451016
• End bp: 451495
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640126409
• Product: preprotein translocase subunit SecB
• Protein accession: YP_001057534
• Protein GI: 126439783
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1952] Preprotein translocase subunit SecB
• TIGRFAM ID: [TIGR00809] protein-export chaperone SecB

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGACG TCGAAAACCA ACCGTTCTTC AACATCCAGC GCATCTACCT GAAGGACCTG 
TCGCTCGAGC AGCCGAATTC GCCCGCGATC TTCCTCGAGC AGGAGATGCC CGCCGTTGAA 
GTCGAGGTCG ACGTGAAGGC CGAACGCCTT GCCGAGAACG TCTACGAGAT CGTCGTCGCG 
GGCACCGTCA CCGCGAAGGT GCGCGAGAAG GTCGCGTTTC TCGTCGAAGC GAAGCAGGCC 
GGCATTTTCG ATATCCGCAA CATCCCGGCC GAGCAGATCG ATCCGCTGTG CGGCATCGCG 
TGCCCGACGA TCCTGTTTCC GTACCTGCGC TCGAACATCG CCGATTCGAT CACCCGCGCG 
GGTTTCCCGC CGATCCACCT CGCCGAGATC AACTTCCAGG CGCTGTACGA GCAGCGCCTC 
GCCGAAATCT CGCAGCAACA ACAGCAAGGC GGCGCGCCGA ACGGCACGAC GCTGAACTGA 

 

Protein sequence

MSDVENQPFF NIQRIYLKDL SLEQPNSPAI FLEQEMPAVE VEVDVKAERL AENVYEIVVA 
GTVTAKVREK VAFLVEAKQA GIFDIRNIPA EQIDPLCGIA CPTILFPYLR SNIADSITRA 
GFPPIHLAEI NFQALYEQRL AEISQQQQQG GAPNGTTLN