Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_0300 |
Symbol | |
ID | 4882490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 282707 |
End bp | 284383 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640126228 |
Product | manganese transporter NRAMP |
Protein accession | YP_001057353 |
Protein GI | 126439721 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAACGC CAACCGACAT CTCGCCGCCC ATCGCGCTCG AGCGCGATGC GGTGCTCGAT CAAGCGCACG TGGGCGACAT CAAGGGCGCG TTCGGCACGA TCGCGCACCA CGACACCGCG CCGCGCAGCG GCTGGTGGGC GCGCATGCGC ACGCTGCTCG CGATCCTCGG CCCGGGCCTC ATCGTGATGG TCGGCGATAA CGACGCCGGC GCGTTCGGCA CCTATACGCA GGCGGGGCAG AACTACGGCA CGTCGCTGCT GTGGACGCTG CTGCTGCTCG TGCCCGTGCT GTTCGTGAAC CAGGAGATGG TGTTGCGTCT GGGCGCCGTC ACGGGCGTCG GCCACGCGCG TCTCATCTTC GAGCGCTTCG GCAAGTTCTG GGGTGCATTC AGCGTGATCG ATCTGTTCAT CCTGAACGCG CTCACGATCG TCACCGAGTT CATCGGCATC ACGTTCGTGC TGGATTTCTT CGGCGTGTCG AAGGTCGCGG GCGTGTGCAT CGCGGCGGCG CTCACGATGG CGGCCGTCAG CACGGGCGAC TTCCGCCGCT TCGAGCGTTT CGCGGTCGCG CTCTGCGTGC TGAGCCTCCT GCTCGTGCCG GTGCTCGTAT CGATTCATCC GCCCGTGCAC CAGATGGCGC GCGATCTGTT CGTGCCGACC TGGCCCGCGC ACGCGAAGCG CTCCGACGTG ATGCTGCTCG TGATCGGCAT CGTCGGCACG ACGGTCGCGC CGTGGCAGTT GTTCTTCCAG CAGAGCTACG TGATCGACAA GCGGATCACG CCGCGCTTCA TCAAGTACGA GAAGGCGGAT CTGTGGATCG GCATCGTGCT CGTGATGATC GGCGCGATCG CGATGATCTC GTTCAGCGCG GCGCTCTACG CGGGCCGCCC GGAGGCGGGC GGCTTCACCG ATGCAGGCGG CGTGATCGCG GGCCTGGCGA AGTACGCGGG CCCGACGAGC GCGACGCTGT TCGCGATCGC GCTGCTCGAC GCGTGCATCA TCGGCGCGGC GGCCGTGTCG CTCGCGACCG CGTATGCGAT CGGCGACGTG TTCAGGATCC GCCACTCGCT GCATCGCGGC GTGTCGGACG CGAAGGGTTT CTATCTGGTC TACTTCGGCA TCGTCGCCGC GGCGGCCGCG CTCGTGCTGA TGCCGGGCAG CCCGCTCGGC CTGCTCACGG AAGCGGTGCA GACGCTCGCG GGCGTGCTGC TGCCGAGCGC GACGGTGTTC CTGCTGCTGT TGTGCAACGA CCGCGCCGTG CTCGGCCCGT GGGTCAATTC GGCAAGATTG AATCTGTTTA CGGGCGCGGT GGTCTGGGTG CTCGTGATGC TGTCGATCAT CCTGACGGCC TCCGTGATGT ACCCGGACAT GAGCGGCGAA GCGATGCTCG AAGTGCTCGC GGGCGGCACG CTCTTCGCGG CGCTCGGGCT CGCGGCGACG TTCGTGCTGC GCAGGCGTGC GGGCGGCGCC GACCGTGCGA ATGTCGCGCA CGACGCGCGC GACGCGCACG TCGATCGCGC CGCGCGCGAC ACGTGGCGGA TGCCGCCGCT CGATGCGTTG CCGGCGCCGC GCGTCACGCT GTCGACGCGC ATCTGGATGG GCGTGCTGCG CGGCTATCTG GTGCTCGCGG TGGGGCTCGT GATCGTGAAG GTCGTGCAGA TGGCGTTTTT CAGGTAG
|
Protein sequence | MSTPTDISPP IALERDAVLD QAHVGDIKGA FGTIAHHDTA PRSGWWARMR TLLAILGPGL IVMVGDNDAG AFGTYTQAGQ NYGTSLLWTL LLLVPVLFVN QEMVLRLGAV TGVGHARLIF ERFGKFWGAF SVIDLFILNA LTIVTEFIGI TFVLDFFGVS KVAGVCIAAA LTMAAVSTGD FRRFERFAVA LCVLSLLLVP VLVSIHPPVH QMARDLFVPT WPAHAKRSDV MLLVIGIVGT TVAPWQLFFQ QSYVIDKRIT PRFIKYEKAD LWIGIVLVMI GAIAMISFSA ALYAGRPEAG GFTDAGGVIA GLAKYAGPTS ATLFAIALLD ACIIGAAAVS LATAYAIGDV FRIRHSLHRG VSDAKGFYLV YFGIVAAAAA LVLMPGSPLG LLTEAVQTLA GVLLPSATVF LLLLCNDRAV LGPWVNSARL NLFTGAVVWV LVMLSIILTA SVMYPDMSGE AMLEVLAGGT LFAALGLAAT FVLRRRAGGA DRANVAHDAR DAHVDRAARD TWRMPPLDAL PAPRVTLSTR IWMGVLRGYL VLAVGLVIVK VVQMAFFR
|
| |