Gene BURPS668_0247 details

Gene Information

• Locus tag: BURPS668_0247
• Symbol: dppF
• ID: 4882681
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: +
• Start bp: 237066
• End bp: 238082
• Gene Length: 1017 bp
• Protein Length: 338 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640126175
• Product: dipeptide transporter ATP-binding subunit
• Protein accession: YP_001057300
• Protein GI: 126441262
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4608] ABC-type oligopeptide transport system, ATPase component
• TIGRFAM ID: [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.169504
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCAG TCCACGAAAC GCGCGAATCC GCCGCGCGCA ACGACGTGGT GCTGGTGGCC 
GACCAGCTCG CGAAGCACTA CGCGGTGCGG CGCGGGATGT TCGGCCACGG CACCGTGAAG 
GCGCTGAACG GCGTGTCGTT CTCCCTCGCG CGCGGCAAGA CGCTCGCCGT CGTCGGCGAA 
TCCGGCTGCG GCAAGTCGAC GCTCGCGCGG CAGCTCACGA TGATCGAGCC GCCGAGCGCG 
GGGCACCTGT CGATCGACGG CCGCGACGTC GCGGGCGCGG ACCGGGAGAC GGTCGCCGCG 
CTGCGCCGCC GCGTGCAGAT GGTGTTCCAG AATCCGTTCG CCTCGCTCAA TCCGCGCAAG 
ACGGTCGAGC AGACGCTTGC CGAGCCGCTC GCGATCAACA CGCGGCTCAC GGCCGCCGAG 
CGCGCGCAGC GCATCGCGCA GATCATGCGC ACGGTGGGCC TGCGCCCCGA GCACGCGAAG 
CGCTATCCGC ACATGTTCTC GGGCGGGCAA CGCCAGCGCG TCGCGATCGC GCGCGCGATG 
ATCCTCGATC CGCAGATCGT CGTCGCCGAC GAGCCGGTGT CCGCGCTCGA CGTGTCGATC 
CAGGCGCAGA TCCTGAATCT CTTCATGGAT CTGCAGGAGC AGTTCAAAAC GAGCTACGTG 
TTCATCTCGC ACAACCTCTC GGTCGTCGAG CACATCGCCG ACGATGTGAT GGTGATGTAC 
TTCGGCAGCG TCGCGGAGCT CGGCGACAAG AAGACGATCT ACGCGCGGCC GCGGCACCCG 
TACACGCGCG CGCTGATGTC GGCGACGCCC GCGATCTTCG AGGCGGATCG CAAGATCCAG 
ATCAAGCTGC AGGGCGAGAT GCCGTCGCCG CTCAACCCGC CGTCCGGCTG CGCGTTCCAT 
CAGCGCTGCC CGTACGCGGT CGAGCGGTGC CGCGTCGAGG AGCCGAAGCT GCGCGACGTC 
GACGGCCGGC TTGTCGCCTG CCATCGCGCC GAGGAGGTGG GGGAGGCGAA TGCCTGA 

 

Protein sequence

MNAVHETRES AARNDVVLVA DQLAKHYAVR RGMFGHGTVK ALNGVSFSLA RGKTLAVVGE 
SGCGKSTLAR QLTMIEPPSA GHLSIDGRDV AGADRETVAA LRRRVQMVFQ NPFASLNPRK 
TVEQTLAEPL AINTRLTAAE RAQRIAQIMR TVGLRPEHAK RYPHMFSGGQ RQRVAIARAM 
ILDPQIVVAD EPVSALDVSI QAQILNLFMD LQEQFKTSYV FISHNLSVVE HIADDVMVMY 
FGSVAELGDK KTIYARPRHP YTRALMSATP AIFEADRKIQ IKLQGEMPSP LNPPSGCAFH 
QRCPYAVERC RVEEPKLRDV DGRLVACHRA EEVGEANA