Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_0183 |
Symbol | slmA |
ID | 4884944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 178591 |
End bp | 179280 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640126111 |
Product | nucleoid occlusion protein |
Protein accession | YP_001057236 |
Protein GI | 126439952 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.24476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCGA CTCACCCGCA TGACCCGGCA GTAACCGCAG CCGCGGAAAA CGAACGCAGC GCCGCCACCG CGAGCCGCAC GCGCCCGAAG CCGGGCGAGC GCCGCGTGCA TATCCTGCAG ACGCTCGCGT CGATGCTCGA AGCGCCGAAG AGCGAGAAGA TCACGACGGC GGCGCTCGCC GCCCGCCTCG ACGTGTCGGA GGCCGCGCTG TACCGGCATT TCTCGAGCAA GGCCCAGATG TTCGAAGGCC TGATCGAATT CATCGAGGAA ACGTTCTTCG GGCTCGTCAA CCAGATCGCC GCGAACGAGC CGAACGGCGT GCTGCAGGCG CGCTCGATCG CGTTGATGCT GCTCAATTTC TCCGCGAAGA ATCCCGGCAT GACGCGCGTG CTGACGGGCG AGGCGCTCGT CGGCGAACAC GAGCGCCTCG CCGAGCGCGT CAATCAGATG CTCGAGCGGG TCGAGGCGTC GATCAAGCAA TGCCTGCGCG TCGCGCTCCT CGAAGCCCAA GCGCATGCGG CCGGCGGCGC GCCGCCGCCC GTTCCGCTGC CGGACGACTA CGATCCGGCG CTGCGCGCGA GCCTCGTCAT CAGCTACGTG CTCGGCCGCT GGCACCGCTA TGCGAAGAGC GGCTTCACGA AGGCGCCCGG CGAGCACGCC GACGCGCAAC TACGGCTGAT CCTGCAGTAA
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Protein sequence | MQPTHPHDPA VTAAAENERS AATASRTRPK PGERRVHILQ TLASMLEAPK SEKITTAALA ARLDVSEAAL YRHFSSKAQM FEGLIEFIEE TFFGLVNQIA ANEPNGVLQA RSIALMLLNF SAKNPGMTRV LTGEALVGEH ERLAERVNQM LERVEASIKQ CLRVALLEAQ AHAAGGAPPP VPLPDDYDPA LRASLVISYV LGRWHRYAKS GFTKAPGEHA DAQLRLILQ
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