Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_0165 |
Symbol | |
ID | 4884310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 156473 |
End bp | 157249 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640126093 |
Product | TPR repeat-containing protein |
Protein accession | YP_001057218 |
Protein GI | 126440185 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.321883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGGGA AACGCCGCGG CGCGCCGCTC TCCACGCGCA CGCCGCGTGT GCTGCGCGGC GCGGTAATCG GTTCGCTCGC CGCGGCGGCG CTCGGTGCGG CGGCGGGCGG CGCGCTTGCG CAGGCGCCGG GCGCGCCGAG CCGGCCCGCC CCGCAGCGCG AGACCGAAGC GGCGGTGGCC GACTACAACG CGGGCAATCT GCGCGCGGCG CTCGTGCAGT TTCACGATGC GGCGGCGCGC GGCAACCGTC TCGCCGCGTT CGATTACGCG ATGATGCTGA TCAACGGTGA GGGCGTGACG GCGAACGTGC CGGAAGGATT GCGCTGGCTG CGGCGCGCGG CCGATGCGGG GATGACGCAG GCGCAGTACG TGTACGGCCG GATGCTCGAC GACGGCGAAT TCGTCGCGCG CGATCCGGCG GCCGCGCACG ACTGGTTCCT GAAGGCCGCG CAGCAAGGGC ACGTGCAGGC CGAGCTCGCG CTCGCGAACC AGTTTCTCGA CGGGCGCGGC ACGCCGCGCG ACAACCGGCA GGCGTTTGCC TGGTACAAGC GCGCGGCCGA CGCGGGCGAG CCGGTTTCGC AATACGTGAC CGCGTCGTTC TACGAGCGCG GCGGCGACGG CGTCGCGCGC AATCTCGACA TCGCCCGCGC GTACTATGCG GCCGCCGCCG CGCAGGGAGA CGACGCGGCG GCGCTCAAGT ATCGCGAGCT CACGGCCGCG CAGAAGGCGG GGCCGGGCGG CGCGTCGGCG CCGAAGGCGA CCGGGCCGTC GTACTGA
|
Protein sequence | MSGKRRGAPL STRTPRVLRG AVIGSLAAAA LGAAAGGALA QAPGAPSRPA PQRETEAAVA DYNAGNLRAA LVQFHDAAAR GNRLAAFDYA MMLINGEGVT ANVPEGLRWL RRAADAGMTQ AQYVYGRMLD DGEFVARDPA AAHDWFLKAA QQGHVQAELA LANQFLDGRG TPRDNRQAFA WYKRAADAGE PVSQYVTASF YERGGDGVAR NLDIARAYYA AAAAQGDDAA ALKYRELTAA QKAGPGGASA PKATGPSY
|
| |