Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A2616 |
Symbol | pedD |
ID | 3692366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 3147326 |
End bp | 3148498 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637732870 |
Product | malonyl CoA-acyl carrier protein transacylase |
Protein accession | YP_337765 |
Protein GI | 76818102 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0488176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAATA CTTTCATGTT TCCGGGCCAA GGTTCGCAAG CGAAGGGAAT GGGCGGCGCC CTGTTCGATC GCTTCGCCGA TCTCACCGCG CAGGCCGACG CCGTGCTCGG TTATTCGATC CGCGCGCTGT GCGTCGACGA TCCGCGCGAC GAGCTCGGCC GCACGCAATT CACGCAGCCG GCGCTATACG TCGTCAATGC CTTGACGTAC TACGCGAAAT GCGAGGACAG CGGCGAGACG CCCGATTTTC TCGCCGGCCA CAGCCTGGGC GAATTCAACG CGCTGCTCGC GGCGGGCTGC TTCGACTTCG AGACCGGCCT GAAGCTCGTC GCCCGGCGCG CAGAGTTGAT GAGCCAGGCC CGCGACGGCG CGATGGCCGC GATCGTCAAC GCGAGCCGCG AGCAGATCGA GCGCACGCTC GACGAGCACG GCCTCGTCGA TACCGCGATC GCGAACGACA ACACGCCGTC GCAACTCGTC ATCTCCGGCC CCGCCCACGA AATCGCGCGA GCCGAGGCGC TGTTCCAGCA CGATCGGGTG CGGTATCTGC GGCTCAATAC CAGCGGCGCG TTCCACTCGA AATTCATGCG GCCTGCGCAG CAGGCATTCG CCGCGCATCT ACAGTCGTTC CGGCTCGCGG ACCCGGCGAT CCCGGTGATC TCGAACGTAT CGGCGCGCCC TTACGAGAAC GGCCGCGTGA GCGAAGGGCT CGCGCAGCAG ATCGCAAGCC CGGTGCGATG GTGCGAGAGC ATTCGCTATC TGCTCGCGCT GGCCGCCGAG CGCGGAGAAG CGATCGAATT CACCGAGCTC GGACACGGCG ACGTACTGAC ACGGCTCGTC CATACGATCC GGCGGCAGAC ACCGGCCCCG GCGGCGGCCG CGACGTCGGC GCGCGCTCGC CCGACGCCGC CCGGCGAGCC CGAGCGGCCC GCGCAGCAGA CGGCGGCCGC GCCGCGCGCA TCCGACTCCG CATCCGCATC GCTCGGCGCG GCCGAACGGG TCGCCGCGTG GAATCGGGAC TACCCCGTCG GCACCCGCGT TCGCTCGTCG CTGATACACG ACGACGTTCT CGAAACGCGG ACCCCGGCAA CCGTGCTGTT CGGCCACCGC GCCGCGGTGT ACATGAAGGG CTACAACGGC TACTTCGATC TCGCCGAAGT GACGCCCGCC TGA
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Protein sequence | MLNTFMFPGQ GSQAKGMGGA LFDRFADLTA QADAVLGYSI RALCVDDPRD ELGRTQFTQP ALYVVNALTY YAKCEDSGET PDFLAGHSLG EFNALLAAGC FDFETGLKLV ARRAELMSQA RDGAMAAIVN ASREQIERTL DEHGLVDTAI ANDNTPSQLV ISGPAHEIAR AEALFQHDRV RYLRLNTSGA FHSKFMRPAQ QAFAAHLQSF RLADPAIPVI SNVSARPYEN GRVSEGLAQQ IASPVRWCES IRYLLALAAE RGEAIEFTEL GHGDVLTRLV HTIRRQTPAP AAAATSARAR PTPPGEPERP AQQTAAAPRA SDSASASLGA AERVAAWNRD YPVGTRVRSS LIHDDVLETR TPATVLFGHR AAVYMKGYNG YFDLAEVTPA
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