Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A2589 |
Symbol | |
ID | 3693066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 3114772 |
End bp | 3116385 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637732843 |
Product | glucose dehydrogenase |
Protein accession | YP_337739 |
Protein GI | 76819092 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGATA CACAACAAGC CGACGTCGTC GTCGTGGGCT CGGGCGTCGC GGGCGCGATC GTTGCTCATC AGCTCGCGAT GGCCGGCAAA TCGGTGATCC TGCTCGAAGC CGGCCCGCGG ATGCCGCGCT GGGAAATCGT CGAGCGGTTT CGCAACCAGC CGGACAAGAT GGATTTCATG GCGCCGTACC CGTCGAGCCC GTGGGCGCCG CATCCCGAGT ACGGCCCGCC GAACGACTAT CTGGTGCTCA AGGGCGAACA CAAGTTCAAC TCGCAGTACA TTCGCGCGGT GGGCGGCACG ACGTGGCACT GGGCCGCCTC CGCGTGGCGC TTCATCCCGA ACGACTTCAA GATGAAGACC GTGTACGGTG TCGGCCGCGA CTGGCCGATC CAGTATGACG ACATCGAGCA TGACTACCAG CGGGCCGAGG AGGAACTGGG CGTGTGGGGG CCGGGCGCGG AAGAGGATCT GCTGTCGCCG CGCAAGCAGC CTTACCCGAT GCCGCCGCTG CCGCTGTCCT ACAACGAGCG GACGATCAAG ACCGCGCTCA ACAACCACGA TCCGAAGTAT CACGTCGTGA CCGAGCCCGT CGCGCGCAAC AGCCGTCCGT ACGACGGCCG GCCGACCTGT TGCGGGAACA ACAACTGCAT GCCGATCTGC CCGATCGGCG CGATGTACAA CGGCATCGTC CATGTCGAGA AGGCCGAGCA GGCGGGCGCG AAGCTGATCG AGAACGCGGT CGTCCACAAG CTCGAGGTGG GGCCGCAGAA GAAGATCGTC GCGGCGCGCT ATAAAGACCC GAAGGGCGTC GAGCATCGCG TCGAGGGCAA GTATTTCGTG CTCGCCGCGA ACGGCATCGA AACGCCGAAG CTGATGCTGA TGTCGACGAG CCACGATTTC CCGAACGGCG TGGGCAACAG CTCCGACATG GTCGGCCGCA ACCTGATGGA CCACCCGGGC ACGGGCGTGT CGTTCTACGC GAGCGAGAAG CTGTGGCCGG GCCGCGGGCC GCAGGAGATG ACCTCGCTGA TCGGTTTTCG CGACGGGGCG TTTCGCGCGA CCGAGGCGGC GAAGAAGATC CATCTGTCGA ACCTGTCGCG CGTCGACCAG GAGACGCAGA AGATCTTCAA GGCGGGCAAG CTGCTGAAGC CCGCCGAGCT CGATGCGCAG ATTCGCGACC GCTCCGCGCG CTACGTGCAG TTCGACTGCT TCCACGAGAT CCTGCCGCAG CCGGAGAACC GCATCGTGCC GAGCCGGACG GCGACCGACG CGATCGGCAT CCCGCGCCCG GAAATCACGT ATGCGATCGA CGATTACGTG AAGCGCGGCG CCGCGCACAC GCGCGAAGTG TATGCGACGG CCGCGCAGGT GCTGGGCGGC ACCGACGTCG CGTTCAACGA CGAATTCGCG CCGAACAACC ACATCACCGG CTCGACGATC ATGGGCGCGG ACCCGCGCGA TTCGGTCGTC GACAAGGATT GCCGCACGTT CGACCATCCG AACCTGTTCG TCTCGAGCAG CGCGACGATG CCGACGGTCG GCACGGTGAA CGTGACGTTG ACGATCGCGG CGCTCGCGCT GCGGATCTCG GACCAGTTGA AGAAGGAAAT CTGA
|
Protein sequence | MADTQQADVV VVGSGVAGAI VAHQLAMAGK SVILLEAGPR MPRWEIVERF RNQPDKMDFM APYPSSPWAP HPEYGPPNDY LVLKGEHKFN SQYIRAVGGT TWHWAASAWR FIPNDFKMKT VYGVGRDWPI QYDDIEHDYQ RAEEELGVWG PGAEEDLLSP RKQPYPMPPL PLSYNERTIK TALNNHDPKY HVVTEPVARN SRPYDGRPTC CGNNNCMPIC PIGAMYNGIV HVEKAEQAGA KLIENAVVHK LEVGPQKKIV AARYKDPKGV EHRVEGKYFV LAANGIETPK LMLMSTSHDF PNGVGNSSDM VGRNLMDHPG TGVSFYASEK LWPGRGPQEM TSLIGFRDGA FRATEAAKKI HLSNLSRVDQ ETQKIFKAGK LLKPAELDAQ IRDRSARYVQ FDCFHEILPQ PENRIVPSRT ATDAIGIPRP EITYAIDDYV KRGAAHTREV YATAAQVLGG TDVAFNDEFA PNNHITGSTI MGADPRDSVV DKDCRTFDHP NLFVSSSATM PTVGTVNVTL TIAALALRIS DQLKKEI
|
| |