| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2148 |
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| Symbol | pchD |
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| ID | 3693594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 2612518 |
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| End bp | 2614581 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637732402 |
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| Product | salicyl-AMP ligase |
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| Protein accession | YP_337299 |
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| Protein GI | 76819057 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1021] Peptide arylation enzymes |
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| TIGRFAM ID | [TIGR02275] 2,3-dihydroxybenzoate-AMP ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0537387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCCT CATCCACCGC CGCCGATCGG CGTGCCGATT GGCCCGTTGA TTCGCCCGTT
GACTCGCCCG TTGATTCATC CGTTGATTCG CCCGCCGATT CCCGCCCCCA TCGCCGCACC
GGGCCGCATG TCGGATCGCG CGCCCCCCTG CGCGTCGATT CGCCCGCCAA GCGGCCCGCC
CCACTGCACG TCGATTCGGG TGCCCTGCAC GGCGATTCAC GTGCCGATTC GTGTACTGAT
TCGTGTACCG ATTCACGTGC CGATTCGTGC GCAGATTCGG CCTTCGATTC GTCGGCCGCT
TCGCACGTCG ATTCCTGCGC CGATTCGCCG GCCGCGTCTC CCACGGATTC GCCCGCCTGC
GCCCCCAACG TTTCTCCGAA CGTTTCCCCA AACGTTTCTC CCGCCGGCTC GCCGTCGCCG
TTGCCCGCCG CCGCGCGCAA CGCCGCGTCG AGCGACGCGC CCGACTGGCC CGACGACTTC
GCGCGCCGCT ACCGCGCCGC CGGCTACTGG CGAGACGAGA CCTTCTACGG CGCGCTCGCC
GATCGCGCGC GGCGCAGCCC CGCCGCGACC GCGGTCGTCG ACGGCGAGCG CCGCGTCAGC
TACCGCGCGC TGCTCGAGCG CATCCGGCGT CTCGCCGGCG GCTTGCGCCG CCTGGGCCTC
GCGCGCGGCG ACACGGCCGT CGTGCATCTG CCGAACGGCG TGCGCTTCAT CGAAGCGTGC
TTCGCGTTGT TCCAGCTCGG CGTGCGCCCG GTGCTCGCGC TGCCCGCGCA TCGGCAACAC
GAGATCGGCG CGTTCTGCCG CTTCACGAAT GCCCGCGCAT ATCTCGGCGC GGCCCGGCTC
GGCGAGTTCG ACTGCCGCCC GCTCGCTCAC GCACTGCGGG CGAGCTGCCC GGCGCTCGCG
CACATCGTCG TCGCGGGCGA CGATCATGCC TTCTTGCATT TCGATTCGCT GTACGACGCG
CCGCCCGTCG CCGACTGCGC GGCGCGCGCG GACGACATCG CGTGCTTCCA GCTCTCGGGC
GGCACGACGG GCACGCCGAA ACTGATTCCG CGCCGCCATC GCGAGTACCT GTACAACGTG
CGCGCGTGCT CGGACGCGAG CGGCTTCGGC GCCGACACCG TCTATCTGGC CGCGCTGCCG
ATGGCGCACA ACTTCACGCT GTGCTGCCCC GGCGTGATCG GCGCGCTGCT CGCGGGCGGC
CGCGTCGTCG CGACCGAGCA CCCCGAGCCG GAGTGCGGCT TTGCGCTGAT CGCGCGCGAG
CGGGTCACGC ATACGGCGCT CGTCCCGCCG CTCGCGCTAC TGTGGCTGGA CGCGCAGCGC
GAGCGCCGAG CGGACCTGTC GAGCCTGCGC GTGCTGCAGG TCGGCGGCGC GCGGCTGATG
GACCACGCGG CCGAACGCGT GACGCCCGTC CTCGGCTGCC GGCTGCAACA GGTATTCGGA
ATGGCCGAAG GCCTCATCTG CTGCACGCGG CTCGACGATC CGCCCGCGCG CATCGCGCGT
ACGCAGGGCC GGCCGGTGTC GCCCGCCGAC GAAGTGCGCA TCGTCGACGA GGCGGGCCGC
GCCGTCGCGC CTGGCGAGAT CGGCGAATTG CAGGTGCGCG GGCCCTATAC GATCCGCGGC
TACTACCGGC TCGCCGAGCA TCATGCGGCC GCGTTCACGG CCGACGGCTT CTATCGCAGC
GGCGACCGCG TGCGCCGCAC CGAAGAAGGC GACCTCGTCG TCGAGGGCCG CGACAAGGAC
CAGATCAATC GCGGCGGCGA AAAAGTATCC GCCGAGGAAG TCGAAAACCT GCTGCTCGCG
CATTCGCAAA TCCGCGACGC GGCGCTCGTC GCGATGTCCG ATCCGCTGCT CGGCGAGCGC
ACGTGCGCGT TCGTCGTCGC GCGCCCGCCC GCGCCGACCT CGCTCGCGCT GAAGCGGCAT
TTGCGCGACC ACGGGCTCGC CGCGTTCAAG ATTCCCGATC GCATCGAATT CGTGCCGAGC
TTTCCGGAAA CCGGCATCGG CAAGACCAGC AAGAAATCGC TGCGCGACCT GCTGCGCCGC
CGGCTCGAAG CGGCGCGCGC ATGA
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| Protein sequence | MTSSSTAADR RADWPVDSPV DSPVDSSVDS PADSRPHRRT GPHVGSRAPL RVDSPAKRPA
PLHVDSGALH GDSRADSCTD SCTDSRADSC ADSAFDSSAA SHVDSCADSP AASPTDSPAC
APNVSPNVSP NVSPAGSPSP LPAAARNAAS SDAPDWPDDF ARRYRAAGYW RDETFYGALA
DRARRSPAAT AVVDGERRVS YRALLERIRR LAGGLRRLGL ARGDTAVVHL PNGVRFIEAC
FALFQLGVRP VLALPAHRQH EIGAFCRFTN ARAYLGAARL GEFDCRPLAH ALRASCPALA
HIVVAGDDHA FLHFDSLYDA PPVADCAARA DDIACFQLSG GTTGTPKLIP RRHREYLYNV
RACSDASGFG ADTVYLAALP MAHNFTLCCP GVIGALLAGG RVVATEHPEP ECGFALIARE
RVTHTALVPP LALLWLDAQR ERRADLSSLR VLQVGGARLM DHAAERVTPV LGCRLQQVFG
MAEGLICCTR LDDPPARIAR TQGRPVSPAD EVRIVDEAGR AVAPGEIGEL QVRGPYTIRG
YYRLAEHHAA AFTADGFYRS GDRVRRTEEG DLVVEGRDKD QINRGGEKVS AEEVENLLLA
HSQIRDAALV AMSDPLLGER TCAFVVARPP APTSLALKRH LRDHGLAAFK IPDRIEFVPS
FPETGIGKTS KKSLRDLLRR RLEAARA
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