Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1901 |
Symbol | phnT |
ID | 3692300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 2317206 |
End bp | 2318219 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637732155 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_337058 |
Protein GI | 76817468 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR03258] 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.625994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCATCG AGCATCTGAG CGTGCGCTAC GGCGCGCGCA CGGTGCTCGA CGATCTGTCG CTCGAGATCG GCGCGGGCGA GCTGCTCGCC GTGCTCGGCA AGAGCGGCTG CGGCAAGACG ACGTTGCTGC GCTTCATCGC CGGCTTCGTG AAGGCGGACG GCCTGACGGG CACGCTCGCC GTCGCCGGCC GCGACCTCAC GCACGCGCCG CCGCACAAGC GCAACCTCGG ATTGCTGTTC CAGAACTACG CGCTGTTCCC GCACCTGACG GTGTTCGAGA ACGTCGCGTT CGGGCTGCGC GCGCGGCGCA TGTCGTCCGC GGACATCGCG CGGCGCGTCG CCGACGTGCT CAAGCTCGTG CAGCTCGGCG ACGCCGGCCA TCACCTGCCC GCGCAACTGT CGGGCGGCAT GCAGCAGCGC GTCGCGCTCG CGCGCGCGCT CGTGATCGAG CCGGACGTGC TGCTGCTCGA CGAGCCGCTG TCCGCGCTCG ACGCGAACCT GCGCGCGTCG GTGCGCAGCG AGCTGAAGGC GCTGCACGAG CGGCTGCCGA ATCTGACCGT GGTCTGCGTG ACGCACGATC GCGACGACGC GCTCGTGCTC GCCGATCGCG CGCTGCTGAT GCGCGAGGGG CGCGTCGCGC AGCTCGGCAC GCCGCAGCAG TTGTACGACG CGCCCGCCGA CGGCTTCGTC GCGCGCTACC TGGGCGCGGC GAACCTGCTG CCGCCGAACG TCGTGTTCGC GTTCGGCGAT CCGCGCCACG ACGTGCGCGA CAAGGTTGCC TGCGTGCGGC CGGAGCGCCT CGCCGTGCGG CCGCTGGGCG AAGGGCGGCT GCACGGCACG ATCGCGTCGG TCGAATGGCA CGGCGCGGCG CTGTCGCTGA CCGTGATGCT CGACGCGGCG TGCGACGAGC CGGTGCTCGT CACGATGCAG CGCGGCCGGG GCCCGGCACC CGAGCGCGGC GCGCGCGTAT CGCTCGATTG CGAGGCGGAC GATGTCGTCC TTATCTCACC TTGA
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Protein sequence | MRIEHLSVRY GARTVLDDLS LEIGAGELLA VLGKSGCGKT TLLRFIAGFV KADGLTGTLA VAGRDLTHAP PHKRNLGLLF QNYALFPHLT VFENVAFGLR ARRMSSADIA RRVADVLKLV QLGDAGHHLP AQLSGGMQQR VALARALVIE PDVLLLDEPL SALDANLRAS VRSELKALHE RLPNLTVVCV THDRDDALVL ADRALLMREG RVAQLGTPQQ LYDAPADGFV ARYLGAANLL PPNVVFAFGD PRHDVRDKVA CVRPERLAVR PLGEGRLHGT IASVEWHGAA LSLTVMLDAA CDEPVLVTMQ RGRGPAPERG ARVSLDCEAD DVVLISP
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