Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1876 |
Symbol | glcA |
ID | 3694067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 2290638 |
End bp | 2292356 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637732130 |
Product | glycolate permease |
Protein accession | YP_337033 |
Protein GI | 76817632 |
COG category | [C] Energy production and conversion |
COG ID | [COG1620] L-lactate permease |
TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGGTTT GGAACCAGGT CTATCTGCCG CTCGGCGGCG TCGGCTGGTC GGCGCTCGCC GCCGGCGCGC CGATCATTCT GTTCTTCGTG TCGCTCGCGG TGCTGCGGCT CAAGGGGCAC GTCGCGGGCG CGCTCACGCT CGCGCTCGCG CTCGTCATCG CGATCGCCGT CTACGGCATG CCCGCCGAGC GCGCGTTCGC ATCGGCGGCT TACGGCTTCG CGTACGGCCT TTGGCCGATC GCATGGATCA TCGTCACCGC GGTGTTCCTC TACAAGATCG TCGTGAAGAG CGGCCAGTTC GACGTGATCC GCAGCTCGAT CGTCGCGCTG ACCGACGATC AGCGCTTGCA GATGCTGTTG ATCGGCTTCT CGTTCGGCGC GTTTCTCGAA GGCGCGGCGG GCTTCGGCGC GCCGGTCGCG ATCACGGCCG CGCTGCTCGT CGGCCTTGGC TTCAATCCGC TCTATGCGGC GGGCCTGTGC CTGATCGCGG ATACCGCGCC CGTCGCGTTC GGCGCGCTCG GGATTCCGGT GATCGTCGCG GGGCAGGTGT CGGGCCTCGA TCCGATGGCG GTCGGCGCGA TGGCGGGACG CCAGTTGCCG TTCCTGTCGT TCTTTTTGCC GTTCTGGCTC GTGTTCGTGA TGGACGGCGT AAAGGGCGTG CGCGAGACGT GGCCCGCTGC GCTCGTCGCG GGCGGCAGCT TCGCGCTCGT GCAGTTCTTT ACGTCGAACT ACATCGGGCC CGAGCTGCCC GACGTGACCT CGGCGCTCGC GAGCCTCGTC GCGCTCGCGT CGTTCCTGAA GGTGTGGCGG CCGTTGCGCG CGCGCGAGGC CGCGCGCGCG CAACGGCTCG TGTCGGCGGG CGGCGGCGCG CTCGCGCTCG GCGGCATGCC GGGGGGGCTG GGCGGCGCGC GCGCGACGGG CGGCCGGGAG CCTTCGCCGT ATTCGTTCGC GCAGATCGCG CGCGCGTGGT CGCCGTTCGT CGTGCTCACC GTGATGGTGA CGATCTGGAG CATGAAGCCT TTCAAGGCGC TGTTCGCCAA GGGCGGCGCG CTCGCGTTCA CGACGCTGCA GTTCCACGTC GCGCATCTCG ACAAGCTCAC GCAGAAGATG GCGCCCGTCG TCGCGCATCC GACGCCCGTG CCCGCCGTGT TCAACTGGGA TCTGCTCGCG GCGACGGGCA CCGCGATCCT GCTGTCGGCG ATCGTATCGA TGGCAATCCT GAACGTTCCG GCGCGCACCG GCGTGCGCAC GTTCTTCGAG GTGCTGAAGG ACCTGAAGCG CCCGGTGCTG TCGATCGGCC TCGTGCTCGC GTTCGCGTTC GTCGAGAACT ATTCGGGGAT GTCGACGACG CTCGCGCTGC TGCTCGCGGG CACGGGCGCG GCGTTCCCGT TCTTCTCGCC GCTGCTCGGC TGGATCGGCG TGTTCCTGAC GGGCTCGGAC ACGTCGTCGA ACGCGCTGTT CTGTTCGCTG CAGGCGACCA CCGCGCAGCA GATCGGCGTG CCGAGCACGC TGCTCGTCGC GGCGAACACG ACGGGCGGCG TCGCGGGCAA GATGATCTCG CCGCAGTCGA TCGCGGTCGC ATGCGCGGCG GTCGGCCTCG TCGGCCACGA GGCGGATCTG TTCCGCTTCA CGCTGCGGCA TAGCCTGTTC TTCGCGCTCG TCGTCGGTGT GATGACCTGC GTGCAGGCGT ATTGGCTCAC GGGGATGATC GTGCACTGA
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Protein sequence | MQVWNQVYLP LGGVGWSALA AGAPIILFFV SLAVLRLKGH VAGALTLALA LVIAIAVYGM PAERAFASAA YGFAYGLWPI AWIIVTAVFL YKIVVKSGQF DVIRSSIVAL TDDQRLQMLL IGFSFGAFLE GAAGFGAPVA ITAALLVGLG FNPLYAAGLC LIADTAPVAF GALGIPVIVA GQVSGLDPMA VGAMAGRQLP FLSFFLPFWL VFVMDGVKGV RETWPAALVA GGSFALVQFF TSNYIGPELP DVTSALASLV ALASFLKVWR PLRAREAARA QRLVSAGGGA LALGGMPGGL GGARATGGRE PSPYSFAQIA RAWSPFVVLT VMVTIWSMKP FKALFAKGGA LAFTTLQFHV AHLDKLTQKM APVVAHPTPV PAVFNWDLLA ATGTAILLSA IVSMAILNVP ARTGVRTFFE VLKDLKRPVL SIGLVLAFAF VENYSGMSTT LALLLAGTGA AFPFFSPLLG WIGVFLTGSD TSSNALFCSL QATTAQQIGV PSTLLVAANT TGGVAGKMIS PQSIAVACAA VGLVGHEADL FRFTLRHSLF FALVVGVMTC VQAYWLTGMI VH
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