Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1650 |
Symbol | |
ID | 3692000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 2013742 |
End bp | 2015130 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637731904 |
Product | hypothetical protein |
Protein accession | YP_336807 |
Protein GI | 76817698 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.537061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGGTT TCCTCATTCA ACGCCCGTCT CGCCTGCAGA CGCTTGGGGC CGGAACATTC GCGTTGCTGA CGCTGGGCGC GCTCGTGGCC ACCGCGCCGC ACGCGGATCT GCGGCTGCCG CCGATCGAGC CGTTCCTGCC GATGTGCGCG CTGACCGTGT TCAGCACGTC GCTCATCGCG GCCTTCCTGC TCGGCGCGCA GTTCATCGTG ATGCGCCGCC CGATTCTCGG CACGCTGGCC GGCGCGTATG CCTTCGCGGC GATCACGGTC GCACTTCAAC TGCTCGCGTT TCCCGGCGTC TTCGCGCCCA CCGGCCTGCT CGGCGCGCGG CATGAGAGCG CCGCGTGGCT ATGGACCTTC TGGCACGGCG GCTTCCCGCT GTTCGTCGTG CTGGCGATGC TGACGCGATA CCGGCTCGCG AAGCGGCTCA GCAACACCCG CCACGTCGGC CGCTGGCTCG CGACATTGGC CGGCGTGCCG ATCGCGGTCG CGATCGCGCT CGGCCTCGTC GCGCTGCGCG CGGATCTGCC CGCGCCGTTC GGCCCGTCGC TCGACAATGC GCTGCTCGCC GCCGATCCGG TGGCGATCGT CATCTGGACG ATCAACCTCG GCGCGATCGC CGCCGCGCTG TTCGTCGGCC GGATGAGGAC GATGCTCGAC ATCTGGCTCG TCGTCGTGCT GCTCGCCGGC TTCACCGATA CCAGCCTGAA TCTGCTGAGC ACCGCGCGCT TCACCGCCGG CTGGTACGTC GCGCGCCTGT TCAGCATGAT CGCGCCGGGC ATCCTCGTCT GCGTGCTCGT CTGGGAAGTG ACGGTGCTGT ACCGGCGGCT GTTCGACGCG CACGCATCGC TCATGCGGAC CGCTTCGCAC GACGCGCTGA CGATGGTGTA CAACCGCAGC TATTTCAACG AACAGTTCGA GCGCGCCTTT CACTACGCAC GCCGGCACAA CACGCCCCTC GCGCTCGTGA TGGTCGACGA CGATCATTTC AAGCAGTACA ACGATACGTT CGGCCACCTG CAAGGGGACA CGTGCCTCGC CGCCGTCGCG GCCGCGCTGT CCGGCGTCGC GGGCCGTGCG AACGATTTCG TCGCGCGCTA CGGCGGCGAG GAATTCGCCG TCGTGCTGCC CGGGGCGGAC GAACGCGGCG CGGCGACGAT CGCCGAACGG GCACGGCAGG CCGTCGAGCG GCTGCGCATC GCCGCCGACA CGGCGCCCGG CTATGTGACG GTGAGCGCCG GCTACGCGGC GAGCAGCGGC AATCCGTTCG AAACGCCCGG CGCGCTGATC GCGGCCGCCG ACGCGGCGCT CTACCGTGCG AAGATGCTGG GGCGCAACGT CAGCGCCGCG CCCCACCACG ACATGCAGGA TACGGCGATG CGCGACTGA
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Protein sequence | MDGFLIQRPS RLQTLGAGTF ALLTLGALVA TAPHADLRLP PIEPFLPMCA LTVFSTSLIA AFLLGAQFIV MRRPILGTLA GAYAFAAITV ALQLLAFPGV FAPTGLLGAR HESAAWLWTF WHGGFPLFVV LAMLTRYRLA KRLSNTRHVG RWLATLAGVP IAVAIALGLV ALRADLPAPF GPSLDNALLA ADPVAIVIWT INLGAIAAAL FVGRMRTMLD IWLVVVLLAG FTDTSLNLLS TARFTAGWYV ARLFSMIAPG ILVCVLVWEV TVLYRRLFDA HASLMRTASH DALTMVYNRS YFNEQFERAF HYARRHNTPL ALVMVDDDHF KQYNDTFGHL QGDTCLAAVA AALSGVAGRA NDFVARYGGE EFAVVLPGAD ERGAATIAER ARQAVERLRI AADTAPGYVT VSAGYAASSG NPFETPGALI AAADAALYRA KMLGRNVSAA PHHDMQDTAM RD
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