| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1491 |
|---|
| Symbol | |
|---|
| ID | 3692764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 1822464 |
|---|
| End bp | 1823291 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637731745 |
|---|
| Product | squalene/phytoene synthase |
|---|
| Protein accession | YP_336648 |
|---|
| Protein GI | 76818304 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1562] Phytoene/squalene synthetase |
|---|
| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.116412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACGATA ACGAAACCGA CGCCGCTGCC GTCACATCGG GCAGCTCTTT CTATCTCGCG
ATGCGCATCC TGCCCGCGGA GCAGCGCGAT GCGATGTTCC AGGTCTATGC GTTTTGCCGT
GCGGTCGACG ACATCGCCGA CGAAGGCGGC GCGCGCGCGG AGCGCGCGGC GCAGCTCGAC
CGCTGGCGCG CCGACATCGA TGATTGCTAC GCGGGCAAGC CGCGCGCGTC GCTCGTGCCG
CTCGCGCGCG AGATCGGCAA GTTCGGCCTG CATCGCGACG ACTTTCACGC GATGATCGAC
GGCATGGCGA TGGACGCCGC CGAGGACATC TGCGCGCCCG ACGAAGCCAC GCTCGATCTG
TACTGCGACC GCGTCGCGAG CTCGGCCGGC CGGCTATCGG TGAGGATTTT CGGGATGCCG
GACGAGCCCG GCCGCGTACT GTCGCATCAT CTCGGCCGCG CGCTGCAACT GACGAATATC
CTGCGCGACA TCGACGATGA CGCGGCGATC AACCGTTGCT ACCTGCCGCG CGAGCTGCTC
GCGCGCGAGG GCATCGCGAT CGCCGATCCG CAGACGATCG CGCGCGATCC GTTGCTGCCG
CGCGTGTGCG CGACGCTCGT CGAGCGCGCA CTGCACCATT TCGCGCAGGC CGACGCGGTG
ATGGACGCGT CGCCGCGCGC GCAGGTTCGT GCGCCGCGCA TCATGTCGGG CGCGTATCGC
CTGATTCTCG AAGCCGCGGT CGCGCGCGGC TTCGCGCCGC CGCGCGCGCC GCTGCGCAAG
CCGCGCGCGC GAATGCTGCT GCTCGCGGCG CGTTACGCGC TGTTTTGA
|
|---|
| Protein sequence | MDDNETDAAA VTSGSSFYLA MRILPAEQRD AMFQVYAFCR AVDDIADEGG ARAERAAQLD
RWRADIDDCY AGKPRASLVP LAREIGKFGL HRDDFHAMID GMAMDAAEDI CAPDEATLDL
YCDRVASSAG RLSVRIFGMP DEPGRVLSHH LGRALQLTNI LRDIDDDAAI NRCYLPRELL
AREGIAIADP QTIARDPLLP RVCATLVERA LHHFAQADAV MDASPRAQVR APRIMSGAYR
LILEAAVARG FAPPRAPLRK PRARMLLLAA RYALF
|
|---|
| |