Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1421 |
Symbol | phaZ |
ID | 3693761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1731790 |
End bp | 1733061 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637731675 |
Product | intracellular polyhydroxyalkanoate depolymerase |
Protein accession | YP_336578 |
Protein GI | 76817511 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.386025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTACG CGTGGCTCGA AGCGCAACGT GAATTCTTCC GCGCATGCCA GCCGTGGGCG GGCGCCGCGC AGCGCGCGGG CGCGGGCGCG GGCGCGCGCC CGGCCGGCTG GCCGACATGG GGCCCGATGG CGCGCGCGGC CGATGCCGTT CCCGCGCCGC CGCCGTTCGC GATCGCGTCG ATCGAGATCG ACGGCGCGGC CGTGCCGGTC GATGAGTGCG TCGTCGACGA CACGCCGTTC TGCGCGCTGC GCAAGTTCTC CCGCCGGCTA CGCGGCGACG CGGCCGCGCG CCCCGCGGTC TTTCTGTGCA CGCCGCTCGC CGGCCACCAT GCGGTGATGC TGCGCGAGAC CGTCGAGACG ATACTCGCGA CGCGCGACGT CTACGTGACC GACTGGCGCA ACGCGCGCGA CGTCCCGCCC GAAGCCGGCG CGTTCGGCCT CGACGACTAC GTGTGCACGC TCGAGCGCTT CGTCGCCGGC GCGGCCGGCG ACGGGCTGCA CATGATGGCG GTCTGCCAGG CGACGGTGCC CGCGCTCGCG GCCGTCGCGC TGCTCGCGGC GCGCGACGTG CATGTCACGA GCGTCGCGCT GCTCGGCGGC CCCGTCGACA CGCGCTCGCA CCCCACGCTT ATCGATCGCT TCGCGCTCGA ACACGACCTC GACTGGTTCC GCCGCACGGC GATCGACATC GTGCCGCCGC CGTACGCCGG CGCGGGGCGG CGCGTCTATC CGGGCTTCAT CCAGCATGCG GCGATCATCG TCGCGCATCC GCAGCGGCGC GCGTCGCTCG AGAGCCGCTA CTGGGCCGCA TGGATGACGG GCGACTTCGC GGCCGCCGCG CGGTGCCTAC GCGAGATGAA CGAATACGGC GCGGTGCTCG ACATGACCGA GCGCTATTTC CTCGATACGA TTCGCGTGAT CTTCCACGAG CGGCTGCTCG CGCAGGGGCG CTGGTCGATC GGCCGCCGCC TCGTCGCGCC GCAGCGGCTC ACGCGCACCG CGCTCTGCAC GATCGAGGGC GGCCGCGACG ACATCGCCGG CGCCGGCCAG ACGCACGCGG CGCACGCACT ATGCGACGCG GTGCCCGACG CCGTGCGCGA GCGGATCACC GAGCCGGACT GCGATCACTA CGACCTCTTC CTCGGCCCGC GCTGGCGGCG CACGATCCAT CCGGCGCTCG ACGCATTCTG GACGCGCGCG GAAGCGGCGC GTGCCGCAGC CGGCGAGCCG CGGCCCACCG CCGAGCGTGC GGAGCGCCGC ATCGCGCACT GA
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Protein sequence | MLYAWLEAQR EFFRACQPWA GAAQRAGAGA GARPAGWPTW GPMARAADAV PAPPPFAIAS IEIDGAAVPV DECVVDDTPF CALRKFSRRL RGDAAARPAV FLCTPLAGHH AVMLRETVET ILATRDVYVT DWRNARDVPP EAGAFGLDDY VCTLERFVAG AAGDGLHMMA VCQATVPALA AVALLAARDV HVTSVALLGG PVDTRSHPTL IDRFALEHDL DWFRRTAIDI VPPPYAGAGR RVYPGFIQHA AIIVAHPQRR ASLESRYWAA WMTGDFAAAA RCLREMNEYG AVLDMTERYF LDTIRVIFHE RLLAQGRWSI GRRLVAPQRL TRTALCTIEG GRDDIAGAGQ THAAHALCDA VPDAVRERIT EPDCDHYDLF LGPRWRRTIH PALDAFWTRA EAARAAAGEP RPTAERAERR IAH
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