Gene BURPS1710b_A1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1421 
SymbolphaZ 
ID3693761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp1731790 
End bp1733061 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content74% 
IMG OID637731675 
Productintracellular polyhydroxyalkanoate depolymerase 
Protein accessionYP_336578 
Protein GI76817511 
COG category[I] Lipid transport and metabolism 
COG ID[COG4553] Poly-beta-hydroxyalkanoate depolymerase 
TIGRFAM ID[TIGR01849] polyhydroxyalkanoate depolymerase, intracellular 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.386025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTACG CGTGGCTCGA AGCGCAACGT GAATTCTTCC GCGCATGCCA GCCGTGGGCG 
GGCGCCGCGC AGCGCGCGGG CGCGGGCGCG GGCGCGCGCC CGGCCGGCTG GCCGACATGG
GGCCCGATGG CGCGCGCGGC CGATGCCGTT CCCGCGCCGC CGCCGTTCGC GATCGCGTCG
ATCGAGATCG ACGGCGCGGC CGTGCCGGTC GATGAGTGCG TCGTCGACGA CACGCCGTTC
TGCGCGCTGC GCAAGTTCTC CCGCCGGCTA CGCGGCGACG CGGCCGCGCG CCCCGCGGTC
TTTCTGTGCA CGCCGCTCGC CGGCCACCAT GCGGTGATGC TGCGCGAGAC CGTCGAGACG
ATACTCGCGA CGCGCGACGT CTACGTGACC GACTGGCGCA ACGCGCGCGA CGTCCCGCCC
GAAGCCGGCG CGTTCGGCCT CGACGACTAC GTGTGCACGC TCGAGCGCTT CGTCGCCGGC
GCGGCCGGCG ACGGGCTGCA CATGATGGCG GTCTGCCAGG CGACGGTGCC CGCGCTCGCG
GCCGTCGCGC TGCTCGCGGC GCGCGACGTG CATGTCACGA GCGTCGCGCT GCTCGGCGGC
CCCGTCGACA CGCGCTCGCA CCCCACGCTT ATCGATCGCT TCGCGCTCGA ACACGACCTC
GACTGGTTCC GCCGCACGGC GATCGACATC GTGCCGCCGC CGTACGCCGG CGCGGGGCGG
CGCGTCTATC CGGGCTTCAT CCAGCATGCG GCGATCATCG TCGCGCATCC GCAGCGGCGC
GCGTCGCTCG AGAGCCGCTA CTGGGCCGCA TGGATGACGG GCGACTTCGC GGCCGCCGCG
CGGTGCCTAC GCGAGATGAA CGAATACGGC GCGGTGCTCG ACATGACCGA GCGCTATTTC
CTCGATACGA TTCGCGTGAT CTTCCACGAG CGGCTGCTCG CGCAGGGGCG CTGGTCGATC
GGCCGCCGCC TCGTCGCGCC GCAGCGGCTC ACGCGCACCG CGCTCTGCAC GATCGAGGGC
GGCCGCGACG ACATCGCCGG CGCCGGCCAG ACGCACGCGG CGCACGCACT ATGCGACGCG
GTGCCCGACG CCGTGCGCGA GCGGATCACC GAGCCGGACT GCGATCACTA CGACCTCTTC
CTCGGCCCGC GCTGGCGGCG CACGATCCAT CCGGCGCTCG ACGCATTCTG GACGCGCGCG
GAAGCGGCGC GTGCCGCAGC CGGCGAGCCG CGGCCCACCG CCGAGCGTGC GGAGCGCCGC
ATCGCGCACT GA
 
Protein sequence
MLYAWLEAQR EFFRACQPWA GAAQRAGAGA GARPAGWPTW GPMARAADAV PAPPPFAIAS 
IEIDGAAVPV DECVVDDTPF CALRKFSRRL RGDAAARPAV FLCTPLAGHH AVMLRETVET
ILATRDVYVT DWRNARDVPP EAGAFGLDDY VCTLERFVAG AAGDGLHMMA VCQATVPALA
AVALLAARDV HVTSVALLGG PVDTRSHPTL IDRFALEHDL DWFRRTAIDI VPPPYAGAGR
RVYPGFIQHA AIIVAHPQRR ASLESRYWAA WMTGDFAAAA RCLREMNEYG AVLDMTERYF
LDTIRVIFHE RLLAQGRWSI GRRLVAPQRL TRTALCTIEG GRDDIAGAGQ THAAHALCDA
VPDAVRERIT EPDCDHYDLF LGPRWRRTIH PALDAFWTRA EAARAAAGEP RPTAERAERR
IAH