| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1387 |
|---|
| Symbol | |
|---|
| ID | 3693326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 1693222 |
|---|
| End bp | 1694976 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637731641 |
|---|
| Product | carbamoyltransferase family protein |
|---|
| Protein accession | YP_336544 |
|---|
| Protein GI | 76819822 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2192] Predicted carbamoyl transferase, NodU family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.126223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAT CCCGTCCACC GCTCTACACG CTCGGCATCA ACGCCGCGTT CCACGATAGC
GCCGCGTGCC TCGTGCGCGA CGGCGTCGTC GTCGCGGCGG CCGAGGAGGA GCGCTTCACG
CGCATCAAGC ACGGCAAGCG CCCGGTGCCG TTCTCGACCT GGGAGCTGCC GTATCACGCC
ATCGACTATT GCCTCGCCGA GGCGGGCATC ACGCTCGCCG AAGTCGCGCA CGTCGCGTAC
TCGTACGATC CGTGGCAGCA GATCGAGCGC GACGGCCGCG AGCCGACGTT CACGCTGCCG
CTGTCGCCAT CCGCGCATGC GCGCGCGAAC GGGCATGCGT CGCCGTGGGA GCCGCTATTC
CTGTCGTACA TCGTCAACGC GCCGCGCCAG CTCGCGGACG GCGCGCCGCA TCATCTGCGC
CGGCGCTTTC GCGGCGTGAC GCCCGATGGG CCGTTCCGCT GGCATTTCGT CGAACATCAT
CTGTCGCACG AGGCGAGCGC GTTCCTCGCC GCGCCGTTTT CGCACTGCGC GGTGCTGACG
ATGGACGGCC GCGGCGAGAA GGCGACGACG AGCTACGGCG TGTTCGACGG CCACGTGTAC
CGCCGTGTCG GCCAAGTCGA TCTGCCGCAT TCGCTTGGCC TGCTGTATGA GCGCGTGACG
CGCCATCTCG GCTTCCTGCA CTCGTCCGAC GAGTACAAGG TGATGGCGCT CGCGTCGTTC
GGCAAGCCGG CGTTCGCGCA CGCGCTGCGC CGCCTCGTGC GCTATGTCGG CGACGGCCGC
TACGAAACGC CCGCGCTCGA TCTGCGCGAG CTGCTCGGCC CGCCGCGCGA GCGCGGCGCG
CGCGTCGAGC CGCGCCATTG CGACATCGCG CACTCGCTGC AGGCGGTGCT CGAAGAGGTG
GTGCTGGAGA TCGTCGATTG GCTTGCCGGC GCAACCGGCG AGAAGCGCCT CGCGATGGCG
GGCGGCGTCG CGCTGAACTG CGTGATGAAC GCGAAGATCC GCGATCGCGG CCGCTTCGAG
GACGTCTGGG TGCAGCCCGC CGCGGGCGAC GCGGGCACCG CGCTCGGCGC GGCGCTGTGG
ACGGATTTCA GCGAACGCGG CGAGCGCGGC GGCTGGCGGA TGGATCATGC GTTCCTCGGC
CCGGCATACG ACGAGCGTGC GATCGAGGCG TGCCTGATCG ACGCGAAGCT GCCGTACCGG
CGGCTCGCGA ACGTCGCCGC CGAAACCGCG GCGCTGCTCG CCGCGAACAG GATCGTCGGC
TGGTTCCAGG GCCGCATGGA GTTCGGGCCG CGCGCGCTCG GCGCGCGCTC GATCCTCGCC
TCGCCGATCG ATCCCGGCAT GCAGCAGCGG CTCAACACGA TCAAGGATCG CGAGGACTTT
CGCCCCGTCG CGCCCGTCGT CATCGAGGAG AAGGCGTACC GCTGGTTCAC CGGCGGCAAG
CATGAACGCC TGCGCGCGCC GTTCATGCTG TTCGTCTACG ACGTCGCGCC GGGCGCGCAG
GCGCGGATTC CCGCGGTGCG GCACGTCGAC GGCACCGCGC GCGTGCAGAC CGTGAACCGC
GCGCAGCATC CGCTCTATTA CGACCTCCTG AACGAATTCG ACGCGCTGAC GGGCGTGCCC
GTACTCGTCA ACACGTCGTT CAACACGCGC GGCGAGCCGA TCGTGCGCAC GCCGCGCGAC
GCGCTCGAGT GCTTCTGGAC GTCGCCGCTC GATGCGCTCG TGATCGGCCC GTTTCTGCTG
GAGAAGCCGC TATGA
|
|---|
| Protein sequence | MAKSRPPLYT LGINAAFHDS AACLVRDGVV VAAAEEERFT RIKHGKRPVP FSTWELPYHA
IDYCLAEAGI TLAEVAHVAY SYDPWQQIER DGREPTFTLP LSPSAHARAN GHASPWEPLF
LSYIVNAPRQ LADGAPHHLR RRFRGVTPDG PFRWHFVEHH LSHEASAFLA APFSHCAVLT
MDGRGEKATT SYGVFDGHVY RRVGQVDLPH SLGLLYERVT RHLGFLHSSD EYKVMALASF
GKPAFAHALR RLVRYVGDGR YETPALDLRE LLGPPRERGA RVEPRHCDIA HSLQAVLEEV
VLEIVDWLAG ATGEKRLAMA GGVALNCVMN AKIRDRGRFE DVWVQPAAGD AGTALGAALW
TDFSERGERG GWRMDHAFLG PAYDERAIEA CLIDAKLPYR RLANVAAETA ALLAANRIVG
WFQGRMEFGP RALGARSILA SPIDPGMQQR LNTIKDREDF RPVAPVVIEE KAYRWFTGGK
HERLRAPFML FVYDVAPGAQ ARIPAVRHVD GTARVQTVNR AQHPLYYDLL NEFDALTGVP
VLVNTSFNTR GEPIVRTPRD ALECFWTSPL DALVIGPFLL EKPL
|
|---|
| |