Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1220 |
Symbol | dsdA |
ID | 3693364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 1529246 |
End bp | 1530583 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637731474 |
Product | D-serine dehydratase |
Protein accession | YP_336377 |
Protein GI | 76818241 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3048] D-serine dehydratase |
TIGRFAM ID | [TIGR02035] D-serine ammonia-lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAGTCG GCCGTTCGCT TTCGCTCGAT CCCAATCTAT TAGCTCAGCT TCAATCGCAT TCGCCGACGC TGTGGCTCAA TCCGCATCAA GGCATGCCGC TGCCGGACTT CGCGCCGACC GCCGCGGATC TCGCCGATGC CGACGCGCGC CTGCGCCGCT GCGCCGGCTT GCTGGCCGAG CTATTTGCCG AACTGCGGCC GTCGGGCGGG CTCATCGCAT CGCCGTTGCA GCCGGCCGAG CCATTGAAGC GCGCCGCTCG AGCCGGCCAT GCGCAGGCGG GCGCGTGGTA CGTCAAGCGC GACGATGCAT TGCCGGTGGC CGGCTCGATC AAGGCGCGCG GCGGTTTTCA CGAGGTGCTC GCGCTCGCCG AATCGATCGC CGAGCGGCAC GGCCTCGCGG GCGCCGACAC CGACCGGCGC GCGCTCGCGA GCGGTGCGGC GCGTGCGCGG TTCGCGCGTC ATACGGTGAT GGTCGGCAGC ACCGGCAATC TCGGCTTGAG CATCGGGATG CTCGCGTCGG CGCTCGGGTT CCGCACCGTC GCGCATATGT CGGCCGATGC GAAGGCGTGG AAGAAGGCGC GCCTGCGCAC GCGCGGCGTG GAAGTCGTCG AGCATGCGGG CGATTATGCG AAAGCGGTGG ACGCCGGGCG GCGGCAGGCC GCCGGGATGC CGTGCTGCCA TTTCGTCGAC GATGAAGGCT CGCGGATGCT GTTCCTCGGC TACGCGACGG CCGCCGCCGA GCTCGCCGCG CAACTCGCGC AGGCGGGCCG CCCGGTCGAC GCGCGCCATC CGCTGTTCGT CCATCTTCCG TGCGGCGTCG GCGGCGCGCC GGGCGGCATC GTGTACGGGC TGAAGGCGCT GTACGGCGAG CACGTGCATG CGTTCGTCGC CGAGCCCACC GCGTCGCCTT GCGTGCTCGT GCAGCTCGCG GGCGACGCCG CGCATCCGCG CTCCGTCTAC GACATCGGCC TCGACAATCG GACCGAGGCC GACGGGCTGG CGGTCGCACA GGCGTCGCCT CTCGCCGCTG CGCTGTTGCG CGCGCAGGCC GCCGGCGCGT TCACCGTCGA CGATCGCCAG TTGTTCGCCC ATTTGCTCGA CGCGCGCGAG CGGCTCGGCA TCGACCTCGA GCCGTCCGCG GCGGCCGCGT TCGGCGGCCC GGCGTGGATC GCGGGATCGG ACGCGGGGCG CGCCTATCTG CGCGGCCGGG GCATCGATCC GGATGCGGCG ACGCACGTGA TCTGGGCCAC CGGCGGCTCG CTCGTGCCGG CGCAAGAGCA TCGGCGCTTT CAGGCGCATG CGCGCGCGCA GCGGCAGGTG GGCGGCGCGG GCGCGTGA
|
Protein sequence | MPVGRSLSLD PNLLAQLQSH SPTLWLNPHQ GMPLPDFAPT AADLADADAR LRRCAGLLAE LFAELRPSGG LIASPLQPAE PLKRAARAGH AQAGAWYVKR DDALPVAGSI KARGGFHEVL ALAESIAERH GLAGADTDRR ALASGAARAR FARHTVMVGS TGNLGLSIGM LASALGFRTV AHMSADAKAW KKARLRTRGV EVVEHAGDYA KAVDAGRRQA AGMPCCHFVD DEGSRMLFLG YATAAAELAA QLAQAGRPVD ARHPLFVHLP CGVGGAPGGI VYGLKALYGE HVHAFVAEPT ASPCVLVQLA GDAAHPRSVY DIGLDNRTEA DGLAVAQASP LAAALLRAQA AGAFTVDDRQ LFAHLLDARE RLGIDLEPSA AAAFGGPAWI AGSDAGRAYL RGRGIDPDAA THVIWATGGS LVPAQEHRRF QAHARAQRQV GGAGA
|
| |