Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1207 |
Symbol | |
ID | 3692335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 1517798 |
End bp | 1519162 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637731461 |
Product | ImpJ |
Protein accession | YP_336364 |
Protein GI | 76818810 |
COG category | [S] Function unknown |
COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.740729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGCCAGC GCGTGATCTG GACCGAGGGC ATGTTCCTGC GGCCGCAGCA TTTCCAGCAG CTCGAGCGGC ACTGGGAGCG CTACGTCGGC ATGCGCTGCC TGCCGCTGCA AGGCTTCTAC TGGGGCTACG ACGAGTTGCA GATCGATCGC GAGCTGCTCG CGCTCGGCAA GGTCGCGCTG CTCGCCGCGA CCGGCGTGAT GCGCGACGGC ACGCCGTTCG ACCTGTCGCA TCCGGACGAC CGGCCCGAGC CGCTCGACGT GCCCGCCGAC GCGAAGGATC AGCTCGTCGT GCTCGCGCTG CCGCTGTGGC GCGGCGGCGC GCAGGAGGTG TCGTTCGGCG CGGGCGGCAA CGGCGAAGGC CACGGCGGCG ACGGCAACGC GCACGCGGGC TTCGCGCGCT ACGTCGTGCG CGAATACGAA GTCGCCGACG CGAACGAGGT CGCGCTCGGC CCCGCGCTAT TGCAGACCGG CCGCCTGAAC GTGCGCCTGA TGCTCGAATC CGAATTGACG GGCGACTGGC AGGCGCTCGG CGTCGCGCGC GTCGTCGAGC GGCGCACCGA TGGGCGGCTG CTCGTCGACG ACGGCTACAT TCCGCCGCGG CTTGTCGCGC AGCGCGATCC GGTGCTGCTG CGCCACACGC GCGAGCTGCA CGGGCTGCTC ACGCAACGCA GCGAGGCGCT CGGCGAGCGC CTGTCGGAGC CGGGGCGCGG CGGCGTGTCC GAAGTCGCCG ATTTCCTGCT GCTGCAACTC GTCAACCGCT ATCTGGCGCT CACGTGGCAC GCGCAGCAGG ATGTCGCCGC GCACCCGGAG ACGCTGTTCT GCGATTGGCT GAAGCTCGCG TGCGACCTGA GCACATTCAC CGCGGCCGGC CGCCGGCCGC AGTCGCTCGC GGTCTACCGG CACGACGATC TGCGCGCGAG CTTCGGCGAG CTGATGGCCG AGCTGCGCCG CTCATTGTCG ACGGTGCTCG AGCAGAACGC GATCCAGATC GAGCTGCGCG ACGTGGGCAA CGGCATGAAG GTCGCGACGA TCGCCGATCC GGCGCTGCGC GACACGGCGG GCTTCGTGCT CGCCGTGCGC GCCGACGTGC CGGCCGACAG CCTGCGCGCG CGCTTTCCCG CGCAGGCGAA GCTCGGTCCC GTCGAGCGCA TTCGCGATCT CGTGCAGTTG CAACTGCCGG GCATCGCGAT GCGGCAGTTG CCCGTCGCGC CGCGGCAGAT TCCGTATCAC GCGGGCCACA CGTACTTCGA GATCGACAAG GGCGGCGAGA TGTGGAAACA GCTCGAACGC TCGGGCGGCC TCGCATTTCA TTTCGCCGGC GAATTCCCGG GACTCTCGAT GGAGTTCTGG GCGATTCGCG GGTGA
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Protein sequence | MRQRVIWTEG MFLRPQHFQQ LERHWERYVG MRCLPLQGFY WGYDELQIDR ELLALGKVAL LAATGVMRDG TPFDLSHPDD RPEPLDVPAD AKDQLVVLAL PLWRGGAQEV SFGAGGNGEG HGGDGNAHAG FARYVVREYE VADANEVALG PALLQTGRLN VRLMLESELT GDWQALGVAR VVERRTDGRL LVDDGYIPPR LVAQRDPVLL RHTRELHGLL TQRSEALGER LSEPGRGGVS EVADFLLLQL VNRYLALTWH AQQDVAAHPE TLFCDWLKLA CDLSTFTAAG RRPQSLAVYR HDDLRASFGE LMAELRRSLS TVLEQNAIQI ELRDVGNGMK VATIADPALR DTAGFVLAVR ADVPADSLRA RFPAQAKLGP VERIRDLVQL QLPGIAMRQL PVAPRQIPYH AGHTYFEIDK GGEMWKQLER SGGLAFHFAG EFPGLSMEFW AIRG
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