Gene BURPS1710b_A1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1077 
Symbol 
ID3693369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp1344514 
End bp1346100 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content68% 
IMG OID637731331 
ProductGGDEF domain-containing protein 
Protein accessionYP_336235 
Protein GI76818246 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.918636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCGGC GTCCGCACCC AGCGGCGGCC TCGATCCGGC CGCCCGACAG GCTTTCCGAC 
GTCATGCGCA AGCGTACGAC CTCCTTTGCG ACTCGTTTCC TGCAGCCCTG GACGCAGAGC
CTGATGTCGC CGACGGGCGT AATCGTTTGC GGCATGCTGC TGCTCACGCT GATCTGGCTG
TTTTGCGCAC GCGTGCTGTA CCAGTCGCAC CGGGACGCAT ACCTGCATGC GGTCGACAAC
GCACACAATC TCGTGCTGCT GCTCGAACGC GACATCGCGC GCAACGTCGA GCTCTACGAC
CTGTCGCTGC AGGCGGTCGT CGACGGCGTG AACGATCCGC GCATCATGGC GCTCGATCCC
GCGATACGCG CCAAGGTGCT GTTCGACCGC GCGGCCACCG GCAAGTACCT CGGCACGATC
TCCGTGATGA ACGAGCACGG CGACATCGTG CTCGACTCGC ACTTCCCGCA TCCGCCTGCC
GTCGCGAACT TCTCGTATCG CGACTATTTC GTCTACCAGC GCGATCACCC GAAAGGCGGC
CTCTACATCG GCGAGCCGTA CGCGGCGCGG CTGCGCCACG GCGCGCCGAC GATCGCGCTC
AGCCGGCGCA TCACGCGCGC CGACGGCTCG TTCGGCGGCG TCGTCGTCGG CACGCTCGGC
ATCGACTACT TCCGCTCGCT GCTCGACGGT CTTTCGGTGG GCCCGGACGG CACGGCGGCC
GTCTTCGAGA CCAACGGGCT GATGATCACG CGCCTGCCGT TCGATCCGAA GATGGTCGGA
CGCAGCATCG CCGACTCGGC CCTCTACGCG CACGTGCGCG AGCACGACGC GGGCGTGTTC
ACCGGCGTCG CGTCGATCGA TGGCGTGCGG CGGCTTTACG TGTACAAGCG GCTGCAGGGG
CTGCCGATCG TCGTCAACGT GTCGCCCGCC GAGCGGCACG TCTTCATGCA ATGGCGCATT
CGGGCGCAGC GGCTCGGCGT GCTGATGCTC GTGTTCGGCA TCGCGATCGT CGGCGGCACC
GCGCTGCTCG CGCGCGAGTT GCGCTGGCGG CGGCACGCGG AAATGCGCCT GCAGCGCCTC
GCCCGCACCG ATGCGCTGAC GGGCCTCGGC AATCGGCGCG CGTTCGACGA GAACCTGCGC
AGCGAATGGG CGCGCGCGCT GCGCACCGGC CGCCCGCTGT CGCTGCTGTT CGTCGACATC
GATCAGTTCA AGGACTACAA CGACCACTAC GGCCACCAGG CGGGCGACGA CGTGCTGCGC
GAAGTCGGCG GCTGCCTCGC GGTGAACGTA CGCCGCGCGG CCGACGACGT CGCGCGTTAC
GGCGGCGAGG AGTTCGTGAT CACGCTGCCG GACACCGACG CGAAAAGCGC GGCCGCGATC
GCCGAGTACA TCCGTCGCGC GGTCTACGAT CTCGACATCG AGCACGTGCG CAGCCCGTAT
GCGCGCGTGA CCGTCAGCAT CGGCCTCGTC ACGTCGCACG AGCACATCGC GCACTCGGAC
GCGACGCTCG TGAAGATGGC CGATGCCGCG CTGTACCAGG CGAAATCGAC CGGACGCAAC
CGCGTCTGCG GCGCGCAGCA CGCCTGA
 
Protein sequence
MKRRPHPAAA SIRPPDRLSD VMRKRTTSFA TRFLQPWTQS LMSPTGVIVC GMLLLTLIWL 
FCARVLYQSH RDAYLHAVDN AHNLVLLLER DIARNVELYD LSLQAVVDGV NDPRIMALDP
AIRAKVLFDR AATGKYLGTI SVMNEHGDIV LDSHFPHPPA VANFSYRDYF VYQRDHPKGG
LYIGEPYAAR LRHGAPTIAL SRRITRADGS FGGVVVGTLG IDYFRSLLDG LSVGPDGTAA
VFETNGLMIT RLPFDPKMVG RSIADSALYA HVREHDAGVF TGVASIDGVR RLYVYKRLQG
LPIVVNVSPA ERHVFMQWRI RAQRLGVLML VFGIAIVGGT ALLARELRWR RHAEMRLQRL
ARTDALTGLG NRRAFDENLR SEWARALRTG RPLSLLFVDI DQFKDYNDHY GHQAGDDVLR
EVGGCLAVNV RRAADDVARY GGEEFVITLP DTDAKSAAAI AEYIRRAVYD LDIEHVRSPY
ARVTVSIGLV TSHEHIAHSD ATLVKMADAA LYQAKSTGRN RVCGAQHA