Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1000 |
Symbol | benB |
ID | 3692589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1264168 |
End bp | 1266261 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637731254 |
Product | benzoate 1,2-dioxygenase beta subunit |
Protein accession | YP_336158 |
Protein GI | 76818735 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5517] Small subunit of phenylpropionate dioxygenase |
TIGRFAM ID | [TIGR03232] benzoate 1,2-dioxygenase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCAGT TCCATCTTCA TACCTCGAGG ATATCGATCC GATACTCAAT CAGTGTTGGA CGCACCGTTT TGCCGGCAAC TATCCTCAAT CTGACCGCGC TGTCGTCGAG CACTATACCT GCGAAGCATC GCAGGTTCAC CCGGGGTTTC CCATGCGACG CGCGGCGCGG CGCCTCGCCG GACCGCGCGT CCGCACGCGC GCCGCCCCCG ATCAGAGAGC CCATCAGGAG ACGCCCCCAT GATCCCGATC GACCCGGACC GCCGTGCGAC GCCGCGCCCC ATCGACGATT TCCTCGTCGA AGACAAGGCG CGCGGCGACT ACCGGCTGCA CCGCAGCGCG TTCACCGACG AAATGCTGTT CGAGCTCGAG ATGAAGCACA TCTTCGAAGG CAACTGGATC TATCTCGCGC ACGAGAGCCA GCTCCCGAAC GCGAACGATT ACTACACGAC CACGATCGGC CGCCAGCCGA TCGTGATCGC GCGCAACCGC CACGGCGAGC TGAACGCGTT CGTCAACGCC TGCACGCACC GCGGCGCGAT GCTGTGCCGC CACAAGCGCG GCAACCGCGC GAGCTACACG TGCCCGTTCC ACGGCTGGAC GTTCAGCAAC GGCGGCAAGC TGCTCAAAGT GAAGGACCCC GAAGGAGCCG GCTACCCGGA CTGCTTCAAC CGCGACGGCT CGCACGATCT GAAGAAAGTC GCGCGCTTCG AGAACTATCG CGGCTTCCTG TTCGGCAGCC TGAACCCCGA AGTCGAGCCG CTCGCCGCGC ATCTCGGCGA TGCCGCGCGC ATCATCGACA TGATCGTCGA TCAGTCGGCG GACGGCCTCG AGGTGCTGCG CGGCTCGTCG ACGTACACGT ACGAAGGCAA CTGGAAGCTC ACCGCCGAGA ACGGCGCGGA CGGCTACCAC GTATCGGCCG TTCACTGGAA CTACGCGGCG ACCGTCAACC ACCGCAAGAC CGACGCGCAG CACGAAGACA CGATCCGCGC GATGGACGCG GGCAACTGGG GCCGTCAGGG CGGCGGCTTC TACGCGTTCG ATCACGGCCA CATGCTGCTG TGGACGCGCT GGGCGAACCC GGAGGACCGG CCGAACTTCG ATCGCCGCGA CGAATTCGCC GCGCGCTGCG GCGGCGACGT CGCCGACTGG ATGATCCGGA ACTCCCGCAA CCTGTGCCTG TACCCGAACG TCTATCTGAT GGACCAGTTC GGCTCGCAGA TCCGCGTGCT GCGCCCGCTC GCCGTCGATC GCACCGAGGT CACGATCTAC TGCATCGCGC CGAAGGGCGA GGCGCCCGAC GCGCGCGCGC GGCGCATCCG CCAGTACGAG GATTTCTTCA ACGCGAGCGG AATGGCGACG CCCGACGATC TCGAGGAATT CCGCGCGTGC CAGCAGGGCT ACGCGGGCCG CGCGGTCGAA TGGAACGACA TGTGCCGCGG CGCCTCGCAC TGGATCGAGG GCCCCGACGA AGCCGCGCGC CGGATCGGCA TCCGCCCGCT GATGAGCGGC GTGAAGACCG AGGACGAAGG GCTGTACACG GTCCAGCACC GCTACTGGAT CGCGACGATG AAGCAGGCGC TCGCCGCCGA AAGGAGCGGC GCATGAAGAC GATCGATCTC GCCGACATCC AGGCGTTCCT CTATCGCGAG AGCCGGCTGC TCGACGACAA GGCGTGGGAC GCATGGCTCG ACTGCTATCG CGCGGACGCC GTGTTCTGGA TGCCTTCCTG GGACGACGCG GATGCGCTCG TCACCGATCC GCAGCGCGAA ATCTCGCTGA TCTACTACCC GAACCGGCAG GGGCTCGAGG ATCGCGTGTT CCGCATCAAG ACCGAGCGCT CGAGCGCGAC GGTGCCCGAT ACGCGCACGA GCCACAACAT CGCGAACGTC GAGCGCGAAA GCGCCGATGG CGACGTGCAC ACCGTGCGCT TCAACTGGCA CACGCTCAGC TATCGCTACA AGACGGTGTC GAGCTATTTC GGCATGTCGC GCTACGCGAT CGATTTCTCC GGCGACGCGC CGAAGATCGT CAGCAAGTAC GTCGTCCTGA AGAACGACTA CATCAACCAG CTGATCGACA TCTACCACAT CTAG
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Protein sequence | MPQFHLHTSR ISIRYSISVG RTVLPATILN LTALSSSTIP AKHRRFTRGF PCDARRGASP DRASARAPPP IREPIRRRPH DPDRPGPPCD AAPHRRFPRR RQGARRLPAA PQRVHRRNAV RARDEAHLRR QLDLSRAREP APERERLLHD HDRPPADRDR AQPPRRAERV RQRLHAPRRD AVPPQARQPR ELHVPVPRLD VQQRRQAAQS EGPRRSRLPG LLQPRRLARS EESRALRELS RLPVRQPEPR SRAARRASRR CRAHHRHDRR SVGGRPRGAA RLVDVHVRRQ LEAHRRERRG RLPRIGRSLE LRGDRQPPQD RRAARRHDPR DGRGQLGPSG RRLLRVRSRP HAAVDALGEP GGPAELRSPR RIRRALRRRR RRLDDPELPQ PVPVPERLSD GPVRLADPRA APARRRSHRG HDLLHRAEGR GARRARAAHP PVRGFLQRER NGDARRSRGI PRVPAGLRGP RGRMERHVPR RLALDRGPRR SRAPDRHPPA DERREDRGRR AVHGPAPLLD RDDEAGARRR KERRMKTIDL ADIQAFLYRE SRLLDDKAWD AWLDCYRADA VFWMPSWDDA DALVTDPQRE ISLIYYPNRQ GLEDRVFRIK TERSSATVPD TRTSHNIANV ERESADGDVH TVRFNWHTLS YRYKTVSSYF GMSRYAIDFS GDAPKIVSKY VVLKNDYINQ LIDIYHI
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