Gene BURPS1710b_A0899 details

Gene Information

• Locus tag: BURPS1710b_A0899
• Symbol: barD
• ID: 3693161
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: -
• Start bp: 1156798
• End bp: 1158606
• Gene Length: 1809 bp
• Protein Length: 602 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637731153
• Product: BarD
• Protein accession: YP_336057
• Protein GI: 76817276
• COG category: [I] Lipid transport and metabolism; [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
• TIGRFAM ID: [TIGR01733] amino acid adenylation domain

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGGTT CAGCGGCGTA CCGGCGGGCG ATACAAAAAA GCAACCAGCA GTCTGAGAGA 
AAGCAGCAAG CAGTCAAACG ACGAGGGGCC GGTAGTCGTT GGCGGACGAA CGTGCAGCGC 
GAACGCGCAT GCCGTGCCGT CCGGCCGTCT GCCGGTGCGC AATGCCGCCT GAATCTCGAA 
GGTGCCCGTA AAGAGACATC GCAAAGAGGA TTCAGTCAGA TGGCCAGACA CATCGTTCAA 
GCAATCCAGT CTCACGCGTT CGCGACGCCG TACAAATGCG CGTTGTCCGA TTCCCGCGGC 
GATCTCGGCT ACGCCGATCT CGACAGCTTC AGCACGCGTT TTGCGATGCG CCTGCAGGAT 
CTGGGCTGTC GCCCCGGCGA TCGCGTCGTG ATGCTCGCGA GCCGCCGCGC GCTGCTTGTC 
GCGGCGATCA TCGGCGTGTT CAAGGCAGGC TGCGTGCATG TGCCGCTCGA TCCGCGCATG 
CCGGCCGACC GTCTTCGCTA CATCCTGCAC GACGTCGCGC CGACGCTCGT GATCGCCGAC 
GAGGATCTGA TCGACGCGAT CGAACACGCG CTGCCGGTCG CCGCGCCGAT CGTGCCCGTG 
ACCGAGCTCG AGCGGCTTCT AGACGACGCC GATTCGCCGC GGCTCGACGC GCTCGTGCAG 
CCGTTACCGC TGCCGCCGCT CGACGAGCGA GCGATCGCGT ACTGCATCTA CACGTCGGGC 
TCGACCGGCC GCCCGAAAGG CGTGCTGATC AATCATCGCA GCATCGCGGA TTTCTTCGAG 
GGCACGCGCG CCGTCTACGA TGTCACGGCG CAATCGCGCT GCGCGAGCTT CTCGCCGCTG 
AACTTCGACG TGTACCTGAT GGACATGCTG TTTCCGCTCG CGCAGGGCGC GTCGCTATAC 
GTGCACGACG ACGTGAACGC GCCCGATCTG CTGTTCGACG CGATCCGCGT GCACGACGTC 
ACCCACTTTT CCGCGTGGGG AATGATGCTC GGCCTGATTG CGCAAGCTGA GGAATTCGAA 
TCCGCGCCGC TGCCGCATCT GAAGACGATC CTCACCGGCA CCGACGTGCC CGACGTGAAG 
ACGGTCCAGC GCTGGCTCAG GAAGAGCGCG GGCGTGCAGG TGATCAACGC CTACGGGCCG 
ACCGAAGCCA CCTGCGCGGC GACCGCGCAC GTGATCCGCG AGATCGAGCC GGAGCGGCGC 
ACGCTCTACC CGATCGGCAA GCCGCTCGAG CACGTGCGGG CGCTGCTCGT CGACGAGGGC 
GGCAACCGAA TCACGGCGCC GGGCGTGCCG GGCGAGTTGA TGATCGGCGG CACGCAGGTA 
ATGCAGGGCT ACTGGAATCT GCCGGAAGAA ACGGCGGCGC GGCTCGTGCG TCTCGACGGC 
GTGCCGTTCT ATCGAACGGG CGACGTCTGC GCGTATCTCG CCGACGGCAG CCTCTACTAC 
ATGGGCCGCA AGGATAACGA AGTGAAGATC GGCGGCTACC GGATCCATTT GAGCGAAATC 
CAGCGGGTCA TCAACAGCGT GCCGCACGTG TACGGATCGG AGGTGGTGCT GCTCGAATCG 
CGCTACGGCG AGACGCTGCT CGCCGCCGGC GTGCTGCTCG AACGCGGCGC GCCGCTCGAC 
GCCGATTGCA AGGCCGACGA AATCAGGCAG CGCCTCGCGG CAGAGCTGCC CGCCTACATG 
GTGCCCCGCC ACGTCAAGGT TCTCGAGCAG TTTCCGCAGT TGTCATCGGG AAAGACGGAT 
CGCAAAGCGC TTCTGTCGAT ATTGCAACAG CGCATCAACG AAAGTAACCA GGAGGAAGTG 
AATCCATGA 

 

Protein sequence

MGGSAAYRRA IQKSNQQSER KQQAVKRRGA GSRWRTNVQR ERACRAVRPS AGAQCRLNLE 
GARKETSQRG FSQMARHIVQ AIQSHAFATP YKCALSDSRG DLGYADLDSF STRFAMRLQD 
LGCRPGDRVV MLASRRALLV AAIIGVFKAG CVHVPLDPRM PADRLRYILH DVAPTLVIAD 
EDLIDAIEHA LPVAAPIVPV TELERLLDDA DSPRLDALVQ PLPLPPLDER AIAYCIYTSG 
STGRPKGVLI NHRSIADFFE GTRAVYDVTA QSRCASFSPL NFDVYLMDML FPLAQGASLY 
VHDDVNAPDL LFDAIRVHDV THFSAWGMML GLIAQAEEFE SAPLPHLKTI LTGTDVPDVK 
TVQRWLRKSA GVQVINAYGP TEATCAATAH VIREIEPERR TLYPIGKPLE HVRALLVDEG 
GNRITAPGVP GELMIGGTQV MQGYWNLPEE TAARLVRLDG VPFYRTGDVC AYLADGSLYY 
MGRKDNEVKI GGYRIHLSEI QRVINSVPHV YGSEVVLLES RYGETLLAAG VLLERGAPLD 
ADCKADEIRQ RLAAELPAYM VPRHVKVLEQ FPQLSSGKTD RKALLSILQQ RINESNQEEV 
NP