Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0815 |
Symbol | |
ID | 3692365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 1067672 |
End bp | 1068898 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637731069 |
Product | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein |
Protein accession | YP_335974 |
Protein GI | 76818101 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.713684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCGTC AAGGTGCCGC TCGGCACCGG CGCGCTCGAT GCGTTCGCGC CCGGCGTGCC GATCTCGCTC GAGTTCCAGC CCGAGCATCT GCGGGTCTTC GCATGAACGC GAAGCCGCGC GTGGCGCGCC GCGCTTCGTA TAACCACCAC GCTTCATCAT CCGTCACGAG AGGAAACATC ATGCACCACA CGTTCAACAC GCCGCGCCGC GCGGTTGCGC TGCTGTCGCT CGCCGCGTTC TGCGCGACGG CCGGCGCGGC CGAGCTGACC GTCGTCAATT TCGGCGGCGC GAACGGCGAC GCGCAGAAGG CCGCGTTCAA CCAGCCGTTC GAGAAGGCGA CCGGCAACAA GGTGACGGCC GTCGAATACA ACGGCGAGCA GGCGAAAGTG AAGGCGATGG TCGAGGCGAA GCACGTGAAC TGGGACGTCG TCGAAGTCGA GTCGGGCGAC CTGAACCGCG GCTGCGACGA AGGCCTGTAC GAGAAACTCG ACTGGGCGAA GATCGCGAAG AAGTCCGATC TGATTGCCGA ATCGCCGCAA ACCTGCGGCG TCGGTTTCTT CGTGTGGTCG ACCGCGCTTG CATACGACGC GGACAAGCTC AAGCGCGCGC CCGCCGGCTG GGCCGATTTT TGGGACGTGA AGAAATTCCC GGGCAAGCGC GGGATGCGCA AGGGCGCGCG CTACAACCTC GAGTTCGCGC TGATGGCGGA CGGCGTCGCG CCGAAGGACG TCTACAAGGT GCTCGCGACG AAGGCGGGCC AGGATCGCGC ATTCAAGAAG CTCGACGAGC TGAAGCCGAA CATCCAGTGG TGGGAAGCGG GCGCGCAGCC GCCGCAGTTC CTCGTCGCGG GCGACGTCGT GATGTCGACC GCGTACAACG GCCGAATCAG CGCCGCGCAG AAGGAAGGCA AGAACCTGAA GGTGGTGTGG AGCGGCAGCA TCTACGATCT GGACTACTGG GCGATTCCGA AGGGCACGCC GAACAAGGCG CTCGCCGAGA AGTACATCGC CTACACGCTG TCGTCGAAGC CGCAGCAGGA TTACGCGCAA CACATCGCGT ACGGCCCCGC GAATGTCGCC GCGATCAAGG CGCTCGACGC GAAGACGCTC GCGAACCTGC CGAACTCGCC GGCCAACGGC AAGAACGCGG TGCTGCAGAA CATCACGTTC TGGACCGATC ACGGCGACGA GCTCGAGCAG CGCTTTGCGG CGTGGGCGTC GAAGTGA
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Protein sequence | MLRQGAARHR RARCVRARRA DLARVPARAS AGLRMNAKPR VARRASYNHH ASSSVTRGNI MHHTFNTPRR AVALLSLAAF CATAGAAELT VVNFGGANGD AQKAAFNQPF EKATGNKVTA VEYNGEQAKV KAMVEAKHVN WDVVEVESGD LNRGCDEGLY EKLDWAKIAK KSDLIAESPQ TCGVGFFVWS TALAYDADKL KRAPAGWADF WDVKKFPGKR GMRKGARYNL EFALMADGVA PKDVYKVLAT KAGQDRAFKK LDELKPNIQW WEAGAQPPQF LVAGDVVMST AYNGRISAAQ KEGKNLKVVW SGSIYDLDYW AIPKGTPNKA LAEKYIAYTL SSKPQQDYAQ HIAYGPANVA AIKALDAKTL ANLPNSPANG KNAVLQNITF WTDHGDELEQ RFAAWASK
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