Gene BURPS1710b_A0745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0745 
Symbolomp38 
ID3692469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp988464 
End bp989756 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content63% 
IMG OID637730999 
Productouter membrane porin 
Protein accessionYP_335904 
Protein GI76818322 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.812329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTGATA TAAAACGACT TTCCATCGCT GTCACCTTTT TGAGACACTT TATTTTTTTG 
GATTTCTTGC GTCTGGTGCA GTGCGCTATT CTCCAATCCG CAACAAATAA CGAATCACTC
GCGTGGAGAA ATAACTCGAT GAAGAAACTC GCTCTGTCTA CCCTCTCGCT CGCGCTGCTG
GGCGCAGCCG GTGCAGCTCA GGCTCAAAGC AGCGTCACGC TGTACGGCGT GATTGATACG
TCGATCACTT ATGTCCACGG CAACGACGGC AAGGCCAACA ACGCCTGGCT GATGGGCAGC
GGCAACCTGC AAGGCAGCCG CTGGGGCCTG AAGGGCACCG AGGATCTCGG CGCCGGCCTG
AAGGCGATCT TCCAGTTGGA AAATGGCTTC AACTCGAACG ACGGCACGCT CGGCCAAGGC
AAGCGCATGT TCGGCCGCCA GGCGTTCGTC GGTCTGCAGC ATGACCAGTA CGGCACGCTG
ACGCTCGGCC GTCAGTACGA TCCGCTCGTC GACCTCGTGC AACCGGTGAC GGCCGACAAC
TACTTCGGCA GCCTGTTCGC CACCCCGGGT GACGTCGACA ACAACGACAA CAGCCTGCGC
GTGAACAACA CGGTCAAGTA CACGTCGCCC GTGTTCGCCG GCTTCCAGTT CGAAGCCCTG
TACGGCTTCA GCGGCATCGC GGGCTCGCCG GGCCAAGGCC AGACGTGGTC GGCCGCCGCC
GCATACAACA ACGGCCCGAT CGGCGTCGCG GCCGGCTACT TCTACACGTC GAACCCGTCG
CCGACGGCCG GCTCGCGCTC GACGTGGAGC GGCTCGTCCG ACGCGATCTT CGACGGCGCG
ATCAACAGCG GCTACACGAG CGCGAAGTCG ATCGGCATCG CACAGGTGGC CGGCCAGTAC
GTGTTCGGCC CGGTCACGGT CGGCCTCGGC TACAGCAACG CGCAATACAA GCCGGACGGC
TTCTCGGGCT TCTCGTCGAC CGAGAAGTAC AACACGGGCC GCGGCTTCGT GACGTACCAG
GCCACGCCGG CGCTGCTGCT CGGCCTCGGC TACGCATACA CGAAGGCGAG CGGCGACACG
GACGCGAAGT ACCACCAAGT GTCGATCGGC GCGGACTACG CGCTGTCCAA GCGCACGGAC
GTCTACCTCG CCGGTGCGTA CCAGCACGCG AGCGGCACGC AGCGCGTCGA TGCGACGACG
ACGCAAACGG CGCAGGCATC GATCGGCTCG TACGGCGTGA ACGGTACGAA GTCGCAAGAG
ATGGTGGCTC TGGGCCTGCG CCACAAGTTC TAA
 
Protein sequence
MVDIKRLSIA VTFLRHFIFL DFLRLVQCAI LQSATNNESL AWRNNSMKKL ALSTLSLALL 
GAAGAAQAQS SVTLYGVIDT SITYVHGNDG KANNAWLMGS GNLQGSRWGL KGTEDLGAGL
KAIFQLENGF NSNDGTLGQG KRMFGRQAFV GLQHDQYGTL TLGRQYDPLV DLVQPVTADN
YFGSLFATPG DVDNNDNSLR VNNTVKYTSP VFAGFQFEAL YGFSGIAGSP GQGQTWSAAA
AYNNGPIGVA AGYFYTSNPS PTAGSRSTWS GSSDAIFDGA INSGYTSAKS IGIAQVAGQY
VFGPVTVGLG YSNAQYKPDG FSGFSSTEKY NTGRGFVTYQ ATPALLLGLG YAYTKASGDT
DAKYHQVSIG ADYALSKRTD VYLAGAYQHA SGTQRVDATT TQTAQASIGS YGVNGTKSQE
MVALGLRHKF