| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0688 |
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| Symbol | sctT |
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| ID | 3693476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 883561 |
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| End bp | 885156 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637730941 |
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| Product | SctT |
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| Protein accession | YP_335846 |
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| Protein GI | 76818606 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.833755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTTCCT TAACCAGCGC ACCGACGAAT ACTCGCCGCC CGACGCGACG CTCGCCGCGC
TGCACGAGCT CGCCCGATGA GCGGCCGCCA ACAGCGCGCG TTCGAGACGC TGCTCGCGCG
GCGCGCGCAG CGCGGCGAGC GGCTGCGCGC CGAGCAGCGC GTGCTGCGCG CCGAGCGCGA
CGCCGCGGCG GCCGAGCTCG CGCAGGGCGA AGCGCACGCG CACGCGAAGC GCGACGCGGC
GAACCGGTAC GCCGAGCGGG TCGACGCGAT GGCGGCCGGC CGCGCGCCGT TCACGATCGG
CGATTACGCG GCGTGCCGCC GCTATCGCGA CGCGCTGCTC GACGAGCACG CGCTCGCGAG
CGCGCAATGC GCGCGGCTGC GCGCGGCGCT GCAGGCGAAA GTCGACCGGC TTGCCGCGAC
CGCGCGCCGG ATCGCGCGCA ACGACGCGCA GATCGACGTC GTGCGCGAGC GAATCCGGCG
GCTCGCGCGC GCGGCCGAGG CGGCCGCCGA GGACGCGCAG GACGAGGAAA TCGAGGAAGG
CGTGCTCGCC CGCCGGCTCG CGGCGGCGCG GGCATCGGAC GCATCGAACG AGACGCACGC
ATGACGACCT ACGACATCTT TGCGCTGCAG CACCTGGGCG ACGAATTCAT CCGCTTCATC
GTGCTGCTCG CGCTGTCGAG CGAGCGGCTG CTCGTGCTGA TGGCGATCCT GCCGGCGACC
GCCGACAACG TGATGAAAGG CCCGATGCGC AGCGGCGCGG CGGCGGTGTG GTGCCTGTTC
GTCGCGGGCG GACAGCAGGC GCTGATTCCG CAGCTCCACG GCGCGTTCCT GATGATCGCC
TGCGTGAAGG AGGCCGTGAT CGGGCTCGTG CTCGGCATCG CGGCATCGAC GGTATTCTGG
GCCGCCGAGG CGATCGGCAC GTATCTCGAC GACGTCGCCG GCTTCAACAA CGTGCAGATG
CAGAACCCGA GCTCGGGCGC GCAGACCTCG CTGATGGCGA CGCTGTTCGG GCAACTGACG
ATCGCGTCGT TCTGGCTGCT GGGCGGCATG ACGTTCCTGC TCGGCGCGCT GTACGAATCG
TTCGCCTGGT GGCCGCTCGG ATCGTTCGAT CCGGTGCCCG CGCCGCTGCT CGAGATGTTC
GCGCAGGCGC GCATCGACAT GCTGATGAAC ATGATCGCGC GGATCGCGAC GCCGATGATG
GCGATGCTGT TGCTCGTCGA CCTGGGCCTC GCGTTCGTCG CGCGATCGGC GCAGAAACTC
GATCTGATGT CGGTCAGCCA GCCGCTGAAA GGCGCGATCG CGGTGCTGAT CGTCGCGGTG
CTGGCGGGGA ATTTCGTGAG CGAGATGCGC GGGCAGATTT CGCTCTCGGG ACTGGCGCAG
CAGATCGGGC GACTCGCGCG GCAGCCGGCG GGTGGGGTTT CGGGGGTTTC GGGGGTTTCG
GGGGTTTCGG GGGTTTCGGG GGTTTCGGGG GTTTCGGGGG TTTCGGGGGT TTCGGGGGTT
TCGGGGGTTT CGGGGGTTTC GGGTGCTTCG GGCGCTTCGG GTACGTCAAG CACTTCGAGC
CCTTGGGACG CCACCAGCGT CACAACCGTC CGCTGA
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| Protein sequence | MRSLTSAPTN TRRPTRRSPR CTSSPDERPP TARVRDAARA ARAARRAAAR RAARAARRAR
RRGGRARAGR SARAREARRG EPVRRAGRRD GGRPRAVHDR RLRGVPPLSR RAARRARARE
RAMRAAARGA AGESRPACRD RAPDRAQRRA DRRRARANPA ARARGRGGRR GRAGRGNRGR
RARPPARGGA GIGRIERDAR MTTYDIFALQ HLGDEFIRFI VLLALSSERL LVLMAILPAT
ADNVMKGPMR SGAAAVWCLF VAGGQQALIP QLHGAFLMIA CVKEAVIGLV LGIAASTVFW
AAEAIGTYLD DVAGFNNVQM QNPSSGAQTS LMATLFGQLT IASFWLLGGM TFLLGALYES
FAWWPLGSFD PVPAPLLEMF AQARIDMLMN MIARIATPMM AMLLLVDLGL AFVARSAQKL
DLMSVSQPLK GAIAVLIVAV LAGNFVSEMR GQISLSGLAQ QIGRLARQPA GGVSGVSGVS
GVSGVSGVSG VSGVSGVSGV SGVSGVSGAS GASGTSSTSS PWDATSVTTV R
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