Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0658 |
Symbol | pilT |
ID | 3692525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 858878 |
End bp | 859909 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637730912 |
Product | twitching motility protein |
Protein accession | YP_335817 |
Protein GI | 76819140 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTACCG ACATCCACAT CGAACAGGAC CGCCCCGTCA CGATCAAGAC GCCGCGCGGC TGGGTCGAGA CGAGCGACGA ACCGGTGCTC CTCGACGACA TGCGCCCTCT GCTCGATGCG ATCGACGAGC ACTGGGAGAG CGCGCTGCGC CAGGGCACGC TCGACCGCCC GTTCGTCCTC ACGCGCTGCC GGCTGCGCTG CCACGTGTAT CGCGCGGGCG GCGGGCGCAA GATCGTGATC TCGATGCGGC GGCTGCCGCT CAGGCCGCTG CCGCTCGAGG AGCTCGGCCT GCCCGTCTAC GTGCGCTCGA TGCTCGACAA CACGAAGGGC ATCATCCTCG TCACCGGCCC GACGGGCTCC GGCAAGACGA CGACGATCGC TTCGCTGCTC GAGCACGTCA ACGCGACGCG CAACACGCAT ATCGTCACGA TCGAGGAACC GATCGAATAC TATCTGGAGC GCCGCCAGTC GATCATCTCG CAGCGCGAAG TGCCGACCGA CACGCCGAAT TTCCCGCACG GGCTGCGCGA GGCGCTGCGG CAGAAACCGG ACGTCGTGAT GGTGGGCGAG GTGCGCGACG CGCAGACGGC CGACACGCTG CTGCAGGCGG GCGAATCCGG GCACCTCGTG CTCGCGACGA TGCACACGGG CAGCGCGGTC AGCGCGCTCA ACAAGCTGCT GTCGTTCTTT CCGGTCGAGC AGCGCGACCG GCACGCGGTC GCGCTCGCCG AATCGCTGAT CGGCATCGTC TGCCAGAGCC TCGTGCCGAG CGCGGACGGC GAAAGCCTCG TGCTCGCGAG CGAGTTGCTG TTCAACAACA ACAACCAGGT CGCAAAGCTG ATCGCGGACC CGACCAAGCT GCACCTCGTC AACGAGTTCC TGCGCCGCCG GGAGGACAAC ATGTCGCGCT CGCTGAACGA CGACCTGGCG GCGCTCGCGG CCCGCAACCG GATCACGACG AAGGATGCGT TACGGGCCAC TTACAATCGG CTCGAGCTGC ATGAAATGAT GCAGTCGATT GTTAATCGAT AG
|
Protein sequence | MFTDIHIEQD RPVTIKTPRG WVETSDEPVL LDDMRPLLDA IDEHWESALR QGTLDRPFVL TRCRLRCHVY RAGGGRKIVI SMRRLPLRPL PLEELGLPVY VRSMLDNTKG IILVTGPTGS GKTTTIASLL EHVNATRNTH IVTIEEPIEY YLERRQSIIS QREVPTDTPN FPHGLREALR QKPDVVMVGE VRDAQTADTL LQAGESGHLV LATMHTGSAV SALNKLLSFF PVEQRDRHAV ALAESLIGIV CQSLVPSADG ESLVLASELL FNNNNQVAKL IADPTKLHLV NEFLRRREDN MSRSLNDDLA ALAARNRITT KDALRATYNR LELHEMMQSI VNR
|
| |