| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0656 |
|---|
| Symbol | pilO |
|---|
| ID | 3692042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 854838 |
|---|
| End bp | 856136 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637730910 |
|---|
| Product | putative type IV pilus biosynthesis protein |
|---|
| Protein accession | YP_335815 |
|---|
| Protein GI | 76818266 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC AGGTGATTCA AATCGGCCGC CAGCGTTTCG TCGGCGGCCT GTTCTGGCAA
TCGTTGTCGA GGCGCAACGA GTTGCGCGCC GAAGCGGTCG AGCTCGCGAA GAAACTGAAG
TTCGACCTGA TGGTGCTGCG CATCGATCGC GGCGTCGCGG CGGCGGGCTA CGCGAACACG
CGCGACGGCT TCGCGCCCGG GCATCTGTCG CTCGGCGCGA TGGTGTCGCG CGCGATCGCG
CTGGAGGGCG CGTTCTACAA CGGCCGGCGT CAGCCCGCGC CGAACTGGCT CGGCGCGTTT
GCACTACCCG ACGGGCGCTG GGCGTACTTC GCGGTGCGCG ACCACGCGTT CATGCCGAAC
GGCGACTGGG TCGGCAGCCG CGAGGAGGCG CTCGAGCGGC TGCATACCGA TTACGCGTGG
GGCGGCTGGA ACGTCGTGAT CGGCGAGCCG GAGCTCGAGC GGCAGGGCTT CCAGAATTTT
CAGCCGAAGC GGCTCGACGA TCTGCTGCCG CGCCGCGGCG GCCGGCCGCG CACCGAGCGC
TGGTGGGCGC TCAGGCCCGT CGAGCGGCGT CTGTCGCCGC GCGCCGCGCT GATCGCCGCG
ACGGCGGCGT GCGTCGTGCT CGGCGGCGCG TTCGCGTACT GGCATCATCG CGCGAAGGTC
GAGGCCGAGG AGCGCGAGGC GGCGCTCGAG CGCGTGCGCG CGGAGCTCGC CGCGCGGCAG
GCGAGAAGCG GCCCCGTCGC GCCGCCGTGG GCGGCGCTGC CCGACGCGCT CGCGTTCGCG
CGCGCGTGCG CGATGCGCTT CGGGCGGCTC GCGCCGGGCG GCTGGCGGCT CGAACGCTAC
GAGTGCACGC CGGGCACCGC GCACTACGCG TGGGCGCGCA ACGGCTCGAA CGTGCGCTAC
CTGCTCGTGG TGGAACCCGG CGCGACGCTC GATACCGACG GCGAGCGCGC GACGCTCGAC
GTGCCGCTCA CCGCGCCGAC GGCGAACGAT ACGCCGCTCG CCGACGATTC GGTTGTCAGG
ACACAACTTC TCGCGCGTCT CCAATGGCTC GACGCGGCCG CTAAACTGGA GCGGCTGCTT
CCCGAACAGG GGCCGCGCGC GCCGCTCGCG AATCTCGCGC AACAGGCGGC CGCCTTGCCC
GCTTCGCCCA CGTGGCGCGC GTACCGGCTG AACGCGAATC TCGGCGGCAT CGCGCCGCCG
GAGTTCGTGC GCGCGATCGA CGTGCCGGGG TTGCGCGTCG AGCGCATCGC TTACCAGAAC
AATCAGTGGA CCCTCGAAGG AGTGCTCTAT GCGAAATAG
|
|---|
| Protein sequence | MSAQVIQIGR QRFVGGLFWQ SLSRRNELRA EAVELAKKLK FDLMVLRIDR GVAAAGYANT
RDGFAPGHLS LGAMVSRAIA LEGAFYNGRR QPAPNWLGAF ALPDGRWAYF AVRDHAFMPN
GDWVGSREEA LERLHTDYAW GGWNVVIGEP ELERQGFQNF QPKRLDDLLP RRGGRPRTER
WWALRPVERR LSPRAALIAA TAACVVLGGA FAYWHHRAKV EAEEREAALE RVRAELAARQ
ARSGPVAPPW AALPDALAFA RACAMRFGRL APGGWRLERY ECTPGTAHYA WARNGSNVRY
LLVVEPGATL DTDGERATLD VPLTAPTAND TPLADDSVVR TQLLARLQWL DAAAKLERLL
PEQGPRAPLA NLAQQAAALP ASPTWRAYRL NANLGGIAPP EFVRAIDVPG LRVERIAYQN
NQWTLEGVLY AK
|
|---|
| |