Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0608 |
Symbol | scpA |
ID | 3693715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 800185 |
End bp | 801918 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637730862 |
Product | kumamolisin |
Protein accession | YP_335767 |
Protein GI | 76817289 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4934] Predicted protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTTACA CTTGCTTTGC CGTACTGTCG CACGCTCCCC ATGGCGGCGT GTGTGCGCCG TCCGACATAC CGCCCGGAAC TGCGATCGCG CGACCGTGTC CGAATCCTGG CAATCCGTCA CCACGGCTTC TGGAGGGTCC GAATATGGCA AGGCATCTTC ACGCCGGCAA CGAATCGCAT CTCGTCGCCG AATCCACGTG CATCGGGCCG TGCGATCCGG CCGAGACGAT TCATGTAGTG GTGATGTTGC GGCGACAGCA AGAGCAGCAC CTCGATTCAT TGTTGCAGGG CCTCGCGAGC GGCGATCCGG GCGTGAAGCC TGTCTCGCGC GAGGCGTTCG CCCAGCGTTT CGGCGCGCAT CCCGACGACG TCATGAAAGT CGAGGCATTC GCGCAGCAGC GCGGCCTCGC GGTCGCGCGC GTCGATCCGG TCGAGAGCCT CGTCGTGCTG TCGGGCACGA TCGCGCAGTT CGAGGCGGCC TTCGGCGTGA AGCTCGAGCG CTTCGAGCAT CGGTCGATCG GCCAGTATCG CGGCCGCACG GGCGATATCA CGCTGCCCGA CGAGTTGCAC GGCATCGTCA CCGCGGTGCT CGGGCTCGAC GATCGCCCGC AGGCCCGGCC GCATTTCCGG CTGCGGCCGA CTTTTCTGCC CGCGCGCGCG CCGGCCGTCA CCTACACGCC GCCGCAGCTC GCGGCCCTCT ACGATTTCCC GCCCGGCGAC GGCGCGGGCC AGTGCATCGC GATCGTCGAG CTCGGCGGCG GCTATCGGCC GGCCGAGATC CAGCAGTATT TCGGCGGCCT CGGGCTCGCG CGGCAGCCGA AGCTCGTCGA CGTGAGCGTC GGCGCGGGGC GCAACGCGCC GACGGGCGAT CCGAGCGGGC CGGACGGCGA AGTCGCGCTC GATATCGAGA TCGCGGGCGC GATCGCGCCC GGCGCGACGA TTGCCGTCTA TTTCGCGCAG AACAGCGACG CCGGCTTCAT CCAGGCGGTC AATCAGGCGG TGCACGACAC GACGAACCGG CCCTCCGTCG TGTCGATCAG TTGGGGCGCG GCGGAGGCGA ACTGGACGTC GCAATCGATC CAGGCCTTCG ATAGCGTGCT GCAGTCGGCC GCGGCGCTCG GCGTGACCGT GTGCGCGGCG TCCGGCGATG ACGGCTCGAA CGACGGCCTG CAGGACGGCA CGAATCACGT CGATTTCCCG GCATCGAGCC CGTACGTGCT CGCGTGCGGC GGCACGCGGC TCGACGCGCT GCCGGGGCAG GGCATCCGCA GCGAAGTCGT GTGGAACGAC GAGGCGGCGG GCGGCGGCGC GACGGGCGGC GGCGTCAGCG CCGTGTTCGA CGTGCCGCAG TGGCAGAGCG GCCTGAGCGC GACGCTCGCG CAGGGTGGCG GCGCGTCGCC GCTCGCGAAG CGCGGCGTGC CGGACGTCGC GGGCGATGCG TCGCCCGCGA CGGGCTACGA GGTGTTCGTC GCGGGCACGT CGACGGTGAT GGGCGGCACG AGCGCCGTCG CACCGCTGTG GGCCGCGCTC GTCGCGCGGA TCAATGCGGC GGCGGGCAGC CCCGCGGGCT GGATCAACCC GAAGCTGTAC CGGAACGCGG GCGCGCTGCA CGACATCTCG GTGGGCGATA ACGGCGCGTA TGCGGCGACG CCGGGCTGGG ACGCGTGCAC GGGGCTCGGC AGCCCGGACG GCGCGAAGGT CGCGGCGGCG CTGAAAGGCG GCGCGGCGGG CTGA
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Protein sequence | MLYTCFAVLS HAPHGGVCAP SDIPPGTAIA RPCPNPGNPS PRLLEGPNMA RHLHAGNESH LVAESTCIGP CDPAETIHVV VMLRRQQEQH LDSLLQGLAS GDPGVKPVSR EAFAQRFGAH PDDVMKVEAF AQQRGLAVAR VDPVESLVVL SGTIAQFEAA FGVKLERFEH RSIGQYRGRT GDITLPDELH GIVTAVLGLD DRPQARPHFR LRPTFLPARA PAVTYTPPQL AALYDFPPGD GAGQCIAIVE LGGGYRPAEI QQYFGGLGLA RQPKLVDVSV GAGRNAPTGD PSGPDGEVAL DIEIAGAIAP GATIAVYFAQ NSDAGFIQAV NQAVHDTTNR PSVVSISWGA AEANWTSQSI QAFDSVLQSA AALGVTVCAA SGDDGSNDGL QDGTNHVDFP ASSPYVLACG GTRLDALPGQ GIRSEVVWND EAAGGGATGG GVSAVFDVPQ WQSGLSATLA QGGGASPLAK RGVPDVAGDA SPATGYEVFV AGTSTVMGGT SAVAPLWAAL VARINAAAGS PAGWINPKLY RNAGALHDIS VGDNGAYAAT PGWDACTGLG SPDGAKVAAA LKGGAAG
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