| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0187 |
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| Symbol | sypC |
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| ID | 3693031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 279492 |
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| End bp | 283529 |
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| Gene Length | 4038 bp |
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| Protein Length | 1345 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637730441 |
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| Product | syringopeptin synthetase C |
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| Protein accession | YP_335346 |
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| Protein GI | 76819389 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins
[COG3319] Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGA CGAGCGAGAC CGCGCTGCAC GGCTTCCGGC TGTCGCCCGT GCAGCAGCGT
GTGTGGACCT TGACGGACGC GGGGCGGCTG CCGGCCGCGC AACGGGTGGT CGCACGCTTT
GCGTGGACGG CCGCGCCGCC GTCGCGTGCG GCGCTCGAGG CCGCGCTGAA CGCGCTGATC
GGCCGCCACG AGATCCTGCG CGCGCGCTTC GCGCGATTGC CGGAGATGCG CCTGCCGCTG
CAAACCGCGC CGGACGGCGC GCGCCTGCGG CTCGACGGCG CATGCGCGCC CGACGTGCCC
GGCACGCCGG ACACGCCCGA CATGCCCGAC ATGCCCGACG CGGGTGCGCC GGCGCTGCAC
GCGGCGATGG ACGCAACGGG CCTCGTGCTG TCGCTGCCGG CGCTGTGCGC CGACGGACCG
ACGATGCTGC ACCTCGGCGC CGCGCTCGCC GCGCGGCTCG CCGGCGACGA TGCCGACGGC
CAGGCGCCGC TGCAATTCTT CGATCTCGCG CAGTGGCAGC ACGATCTGCT CGCCGAGGAG
GGCGCGTGGC GCTGGCCCGA CGGCGCGCTG CAGTCCGCGC ACGGGCCGTG GCCCGCGCTG
CCGGCGCTGC GCTCCGCGCG CGCGGCCGCG TACCGCCCGG CGCGGCACGC GTGCGCGCTG
CCCGCGGATA CCGGCGCGCG CGTCGGCGCG CTTTGCGCGC GCCTCGGCGT GACGCCGGCC
GATCTGCTGT GCGCCGTCTG GGCGGTGCTG CTGCACCGAC TGTCGGGCGG CGACACGCTG
CCGGTGGCGA TCGTTGCCGA CGGTCGGCCG TTCGACGAGC TCGCCACGGC GCTCGGCCCG
CTCGCCGCGC CCGTGCCGCT TTCGCTGTCG GCCGCGCTGG GCGCGCCGGA CGGCACGTTC
GCCGGCCTCG CGAAAGCGGC GGCCGACGCG CGCGCGACGG CGGCCGATCT GCGTCATCAT
CTCGTCCCGC CCGACGAGGC GCGCTTCGCG CCGTTCCAGA TCGAAGTGCT CGACGCGGGG
CGGGCGGACG ACGCGCTGCT GCGCGTCGTC GATGTGGCGA CGGCGGGCGA GCCGGCGTTG
CTGAAGCTCT CGGTGCTCGT CGGGCCCGGC GGCGCGCTGC GCGCGGATAT CGACCACGAT
GCCGGCGCGG TGCGCGACGG CGGTGCGATC GCGCGGCTGG CGGAGCAGTT CGCGACGCTG
CTCGACGCGG TGCTCGCGAA CCCGGACGCG ACGTTCGACG AGCCGGACCT GCTGGGCGCG
GCGGAGCGGC GGCTCGTCAC GGAGGATTTT CAGGGGCCGC AGGTGAATCA CGGCCGTTGG
ACGCCCGTGC ATCTGGCGGT GGCCGCGGCC GCCGCCGCGG CGCCCGATCG GCTCGCCGTG
CAGGACGGCG CCGCGCGGCT GACGGCGGCG GCTCTCGAGC GCGCCGTTCG TGCGCTCGCG
GCGCGGCTGA CCGCGGCGGG CGTCGCGGCG CAGACGCTTG TCGCGCTGCA TCTGCCGCGC
GGCGCGGCGC TCGTGACGGC GATACTCGCC GTGATGCGGG CGGGCGGCGT TTTTCTGCCG
ATGCCGCCGG AGCTGCCCGC CGCGCGCCGG CGTTACATGC TCGAGGACAG CGGCGCGCGG
ATCGTGCTGA CGCTGCCGGA CGCCGCGGAC GATCTGCCGC GGGATCTCGC GCTCGTGTGC
GTGTACCCGG GGGAGGCCGA TGTCGATGTC GAGGCCGAAG CCGATGTCGA CATCGACGCG
CGCACGGCGG CATCCGGACC GACCGCGCGC GTCACGGCCG ACGCGCCTGC CGACGCGGGC
GCGGACGCGA CGACCGGCGC TTGCCCCGAC GCGTGGCCTG CCCCCGACCC GACGCAGGCC
GCCTACGTGC TGTACACGTC CGGCTCGACG GGGCGGCCGA AAGGCGTCGT GGTCACGCAC
GGCTCGCTCG CGAACCACAT GGCGTGGATG ACGCGCGCGT TCCCGCTCGA CGCGCACGAC
GCGGTGCTGC AAAAGACCTC GGCCGCGTTC GACGCGTCGA TCTGGGAATT CTTCCTGCCG
CTGCTGGCGG GCGCGCGGCT CGTGATGGCG CCGCCCGGCC TCGAGCGCGA CGTGCCGGCG
CTCGTCGCGA CGCTCGCGCG CGAGCGCATC ACCGTGCTGC AGCTCGTGCC GAGCCTGCTG
CGCGTGCTCG TCGACGCGCC GGGCTTTGGC GCGTGCGACG CGCTGCGATG CGTGTTCTGC
GGCGGCGAAG CGCTGACGGC CGATCTCGCC CGGCGCTTCG CCGCCGCGCA CCGCGCGGCG
CTCGTCAACC TGTACGGCCC GACCGAGACG ACGATCCAGG TTTGCGCGGA GCGGGTCGAC
GCGGCCGACG ATCCCGTGCC GGTCGGCCGC CCGATCGACA ACGTCCGGCT GTACGTCGTC
GATTCGCGCA ACCGGCTCTC GCCCGTGGGC GTGCGCGGCG AGATCCTGAT CGGCGGCGCG
GCGCCCGCGC GCGGCTATCT CGATCGGCCG GCGCTCACCG CCGCGCGCTT CGTCGCCGAT
CCGATCGATC CGCGCGCGCC GCGCGTCTAT CGCAGCGGCG ACGTGGGCGC GTGGCGCGCC
GACGGCCGGC TCGACTTTTT CGGCCGCGCC GACGATCAGG TGAAACTGCG CGGCTACCGG
ATCGAGCTCG GCGAAGTGGA GGCGACGCTC GCCCGGCATC CGGACGTCGC CAACGCGGCG
GCGAGCGTCG ATCTGGACGC GAACGGCATC GCGCGGCTCG TCTGCGCGTA CGACTGCCGC
GCCGGCCGCG GCGTCGAGCC CGCGCCGCTG CGCGCGTGGC TCGCGACGCA GTTGCCGGAC
TACATGGTTC CCGGCCGGTG CCGCCGGCTC GACGCGCTGC CGCGCAACGC GAGCGGCAAG
ATCGACCGCG CGGCGCTGGC GCGCGGCGTC GACGCGCCGC GTGACGGCGC CGCGCCGCGC
GATCCGGTCG AGCTGCGGCT CGAGCGCGTG TGGGAAGCGG TGCTCGACGT TCAGCCGGTC
GGCGTCGATC GGACGTTCTT CGATCTCGGC GGCCATTCGC TGCTGGCCGT GCGGCTGATG
GCGGAAGTCA AGCGCGAGTT CGGCTGCGAT CTGCCGCTCG CGTCGCTGTT CGAGGCGCCC
ACCGTCGCCG CGCAGGCGGC GCTCATCCGG CAGCGCGAGC GGGCGCACCC GGTGGTGGTG
CGCGTCAATC GCGGCATCGA CGGCGAGCGC CCGGTGTTCC TCGTGCACCC GACGGGCGGC
AACGTGCTTT GCTACCGCGA TCTCGCGCGG CGGCTCGGGC CGGCCCGGCC GATCTACGCG
CTGCAGGACC CGGGCCTCGA GGGCGACGCC GGCTACGACA GCGTCGAGGA GCTGGCGGCG
CGCCATATCG CGCACATCCG CCCGCTCGCG GGCGACGGCC CGTATTACCT CGCGGGCTGG
TCGTCGGGCG GCGTCGTCGC GTTCGAGATC GCGCGCCAGT TGCTCGCGCA GCGGTGCGAG
GTCGGGCTGC TCGCGTTGAT CGACAGCGTC GCGTCCGACG GCGCGCAGCC GGCCCCGCGC
ACCGACGCCG AGCTGATCGG CTCGATCGGC CGGCTGCTCG CGTTCGCGGC GGGCGTCGAC
GCGCCGGATC TGGCGGCGCT CGAACCGTCG GCCGCGATGG CGCGGCTGCG CGAGCTGGCC
GTCGCGGCCG GCTCGCTGCC GCCCGATGCG CCGCCCGAGC GGATGCGCCG GCTTTTCGAC
GTCTTCCGCC GCAACGCCGC CGCCGTGCGC CGCTACCGGC CCGGGCCGTA TCCGCGCCGC
GTGCTGCTGC TGCGCGCAAC GCAGCCGCTG CCCGAACCGG TGCGCGACGC CGCCGCGCGC
CAGCGCGGCG ATTCGCCGGA GCTGGGCTGG GAGCGCGTCG CGGTGGTGAG CCGCTGCGAC
ATCCCCGCGC ATCATCTGTC GATCGTCCAC GAGCCGGCCG CGGCGCTCGT CGGCGCGCGG
ATTCGCGACG CGCTGCACGC GGCGGACCGC ATCGAGGCGA TCGGCGAGCG GGTTTTCTTC
ACGTTGCTCG GACACTGA
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| Protein sequence | MSATSETALH GFRLSPVQQR VWTLTDAGRL PAAQRVVARF AWTAAPPSRA ALEAALNALI
GRHEILRARF ARLPEMRLPL QTAPDGARLR LDGACAPDVP GTPDTPDMPD MPDAGAPALH
AAMDATGLVL SLPALCADGP TMLHLGAALA ARLAGDDADG QAPLQFFDLA QWQHDLLAEE
GAWRWPDGAL QSAHGPWPAL PALRSARAAA YRPARHACAL PADTGARVGA LCARLGVTPA
DLLCAVWAVL LHRLSGGDTL PVAIVADGRP FDELATALGP LAAPVPLSLS AALGAPDGTF
AGLAKAAADA RATAADLRHH LVPPDEARFA PFQIEVLDAG RADDALLRVV DVATAGEPAL
LKLSVLVGPG GALRADIDHD AGAVRDGGAI ARLAEQFATL LDAVLANPDA TFDEPDLLGA
AERRLVTEDF QGPQVNHGRW TPVHLAVAAA AAAAPDRLAV QDGAARLTAA ALERAVRALA
ARLTAAGVAA QTLVALHLPR GAALVTAILA VMRAGGVFLP MPPELPAARR RYMLEDSGAR
IVLTLPDAAD DLPRDLALVC VYPGEADVDV EAEADVDIDA RTAASGPTAR VTADAPADAG
ADATTGACPD AWPAPDPTQA AYVLYTSGST GRPKGVVVTH GSLANHMAWM TRAFPLDAHD
AVLQKTSAAF DASIWEFFLP LLAGARLVMA PPGLERDVPA LVATLARERI TVLQLVPSLL
RVLVDAPGFG ACDALRCVFC GGEALTADLA RRFAAAHRAA LVNLYGPTET TIQVCAERVD
AADDPVPVGR PIDNVRLYVV DSRNRLSPVG VRGEILIGGA APARGYLDRP ALTAARFVAD
PIDPRAPRVY RSGDVGAWRA DGRLDFFGRA DDQVKLRGYR IELGEVEATL ARHPDVANAA
ASVDLDANGI ARLVCAYDCR AGRGVEPAPL RAWLATQLPD YMVPGRCRRL DALPRNASGK
IDRAALARGV DAPRDGAAPR DPVELRLERV WEAVLDVQPV GVDRTFFDLG GHSLLAVRLM
AEVKREFGCD LPLASLFEAP TVAAQAALIR QRERAHPVVV RVNRGIDGER PVFLVHPTGG
NVLCYRDLAR RLGPARPIYA LQDPGLEGDA GYDSVEELAA RHIAHIRPLA GDGPYYLAGW
SSGGVVAFEI ARQLLAQRCE VGLLALIDSV ASDGAQPAPR TDAELIGSIG RLLAFAAGVD
APDLAALEPS AAMARLRELA VAAGSLPPDA PPERMRRLFD VFRRNAAAVR RYRPGPYPRR
VLLLRATQPL PEPVRDAAAR QRGDSPELGW ERVAVVSRCD IPAHHLSIVH EPAAALVGAR
IRDALHAADR IEAIGERVFF TLLGH
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