Gene BURPS1710b_A0072 details

Gene Information

• Locus tag: BURPS1710b_A0072
• Symbol: arcD
• ID: 3692066
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: +
• Start bp: 95034
• End bp: 97049
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637730326
• Product: amino acid permease
• Protein accession: YP_335231
• Protein GI: 76819167
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0531] Amino acid transporters
• TIGRFAM ID: [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.137456
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGGGC CATTATCGGC AAGACATCGG CGGCGCGCAA GCCGACATGC CGATCGTTCG 
ATCGCGGCGC GGCGGCCCGG CGATGCGGCG GCCGGCGCGC ATAAGCGGGC GCTTTCGGCG 
GGTTTCGGCG CGCGCGACTG CAGCGATCGG ATCGCGGCAA TTGCGGCAAT TGCGCGCAGC 
GCGCGGCGCG CGGCGGCCCG CGCGGGCGCG TTCACGCCGG GCGGGCACGC TTCATCTGCG 
TCGCGCCGCG GCGAGCGCGC CCGCGCGCCT GCGCGCCGCG GCCGACCGGC GACGCCCCGC 
TTCGTCACCC GCTTCGTCGC CCGCTTTTCG ACCCGCAAGC AACCGCTTTC GGCTCGCCGC 
ACATGCCTCG TCGACACCGC ATTCACGCCA CATTCACGCC ACATTCACGC CGCATTCACG 
CCGCATTCAC GCCGAAACGC GCCCCGCGCG CCGCTGATCC AGGTCAATCC GGCCTGCCGG 
GCCCGGTGTC TTAATACATT CAACATTCGT CGTGGAGGTT TCATCATGAA GCATTCCGTC 
AGGCATCCTT TCCACCCGTC GACACCGCTG CCCGCGCGCG CCTCCGCGCC GCTGCGGGCG 
GCCGCGCCGC GCCAGTTGCC GTTTGCGCTG CTCACGGCGC TCGTGATCGG CTCGATGATC 
GGCAGCGGCA TCTTCTCGCT GCCGCAGAAC ATGGCATCCG GTGCGGGCGC CGGCGCGATC 
GTGATCGGCT GGGCGATCAC GGGCGTCGGC ATGCTGATGC TCGCACTCGT CTACCAGACG 
CTCGCGCATC GCAAGCCCGA GCTCGACAAC GGCGTCTACG CGTACGCGCA CGCGAGCGCC 
GGCGACTTCG TCGGCTTCAA CTCCGCATGG GGCTACTGGG TCAGCGCGTG GATCGGCAAC 
GTCGGCTATT TGGTGATCGT GTTCGGCACG CTCGGCTACG CGTTTCCGGC GTTCGGCGAC 
GGCAACACGC GCGCCGCGGT GATCGGCGCG TCGATCGTGC TGTGGATCAT GCACGCGGTG 
ATCCTGCGCG GCGTGCGCGG CGCGGCGATC CTCAACGCGC TGACGACGAT CGCGAAGATC 
GTGCCGCTCG TGCTGTTCGT CGCGCTCGCC GCGCTCGCGT TCCAGCCGCA CCGCTTCACG 
ACCGACTTCT GGGGCAACGT CCACCTGCCC GGCGTGCTCG ACCAGGTGAA GAGCACGATG 
CTGATCACCG TCTGGGTGTT CATCGGCATC GAGGGCGCGA GCGTCTATTC GGCCCGCGCG 
AAGAACCGCG ACGACGTCGG CCGCGCGACC ATCGTGGGCT TCGTCGTCGT GCTGCTGTTG 
CTGATGGCCG TCTCGCTGCT CTCGCTCGGG ATCGTGTCGC AGCCCGAGCT CGCGGCGATG 
AAGAATCCGT CGATGGCGGG CGTGCTCGAA AAGGCGATCG GCCGCACGGG CGTCGCGATC 
GCGGGCGTCG GGCTGCTGGT GTCGGTGGGC GGCGCGCTGC TCGCATGGAC GCTGCTCGCC 
GCCGAGGCGA TGTTCACGCC GGCCAAGGAC GGCGTGATGC CGGCGTTCCT GTCGCGCGAG 
AACGCGCACG GCGTGCCCGC CAACGCGCTG TGGGCGACCA ACGGCCTCGT GCAGCTGTTC 
CTGCTCGTCA CGCTCGTGTC GAACGCGACG TATCAGGCGC TGATCTCGCT CGCGACGTCG 
ATGATCCTCG TGCCGTACCT GTTCTCCGCC GTCTATGCGC TCGTCATCGC GATCAAGGGC 
GAAGGCTATG CGCCCGGCGA GGCGGTGCGC GTGCGCGACG CGACGATCGG TGCGGTCGCG 
ACCGTCTACT GCTGCTGGCT GCTGTATGCG GCGGGCCCGA AATACCTGCT GCTGAGCGCC 
CTCCTCTATG CGCCGGGCGC GCTGCTGTAC GCATGGGCGA AGCGCGAGCG CGGCGAGCGG 
CCGTTCAAGC CGTTCGAAGC GGCGATCCTG ATCGCGCTCG TCGCGTTCGC GTCGCTCGCG 
GGCTGGCTCG TCGCGGCGGG CCGGATCAGC CTGTAA 

 

Protein sequence

MAGPLSARHR RRASRHADRS IAARRPGDAA AGAHKRALSA GFGARDCSDR IAAIAAIARS 
ARRAAARAGA FTPGGHASSA SRRGERARAP ARRGRPATPR FVTRFVARFS TRKQPLSARR 
TCLVDTAFTP HSRHIHAAFT PHSRRNAPRA PLIQVNPACR ARCLNTFNIR RGGFIMKHSV 
RHPFHPSTPL PARASAPLRA AAPRQLPFAL LTALVIGSMI GSGIFSLPQN MASGAGAGAI 
VIGWAITGVG MLMLALVYQT LAHRKPELDN GVYAYAHASA GDFVGFNSAW GYWVSAWIGN 
VGYLVIVFGT LGYAFPAFGD GNTRAAVIGA SIVLWIMHAV ILRGVRGAAI LNALTTIAKI 
VPLVLFVALA ALAFQPHRFT TDFWGNVHLP GVLDQVKSTM LITVWVFIGI EGASVYSARA 
KNRDDVGRAT IVGFVVVLLL LMAVSLLSLG IVSQPELAAM KNPSMAGVLE KAIGRTGVAI 
AGVGLLVSVG GALLAWTLLA AEAMFTPAKD GVMPAFLSRE NAHGVPANAL WATNGLVQLF 
LLVTLVSNAT YQALISLATS MILVPYLFSA VYALVIAIKG EGYAPGEAVR VRDATIGAVA 
TVYCCWLLYA AGPKYLLLSA LLYAPGALLY AWAKRERGER PFKPFEAAIL IALVAFASLA 
GWLVAAGRIS L