| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0009 |
|---|
| Symbol | chaA |
|---|
| ID | 3694225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 29352 |
|---|
| End bp | 30494 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637730263 |
|---|
| Product | calcium/proton exchanger |
|---|
| Protein accession | YP_335168 |
|---|
| Protein GI | 76819721 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0387] Ca2+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGACC GCCTGTTAGA ATCGCTGCTC GCGCCCTGCC ACGACCAAGG ACACTCCATG
CCGATCTCTT CGTCCGCCCT GCCGCGCTGG ACGCTCGTCG CCCCGCTCGC CGCCTGGCTG
GTGCTCGCGC TGTCGCGCGT CGTGCCGGCC GAAGGCTTCG CCATCGCATT CGTCGCCGCC
GCGCTCGCGG GCGCGGTGTT CTCCGCGGTG CATCACGCCG AAGTCGTCGC GCACCGCGTC
GGCGAGCCGT TCGGCACGCT CGTGCTCGCG ATCGCCGTCA CCGTGATCGA GGTCGCGCTG
ATCGTCTCGG TGATGCTGTC GGCCGGCCCC GAGAAAGCGG GGCTCGCGCG CGACACCGTG
TTCGCCGCGG TGATGATCGT CTGCAACGGG ATCGTCGGGC TGTGCCTGCT CGTCGGCGGC
TGGCGGCACG GCGAGCAGGA CTTCCAGGGG CGCGGCGCGA CGAAGGCGCT CGCGGTGCTC
GCGTCGCTGT CGGTGCTCTC GCTCGTGATG CCGAACTATC TGAGCGCCGC GCCGGGCCCA
CGGCTGTCGA CGTCGCAGCT CGCGTTCGCG GGCGTGTCCT CGCTCGTGCT GTACGGCGTG
TTCGTGTTCG TGCAGACGGT TCGCCATCGC GATTACTTCC TGATCGACGG CAGCGCCGAC
GAATCCGTCC ATGCGGTGCC GCCGAGCGGC CGCACCGCGC TCACGAGCAT CGCGTTCCTG
TTCGTGAGCC TCGTCGCGGT CGTGCTGCTC GCGAAGCTGC TGTCGCCCGC CGTCGAGCGC
ACGGTGCTGC GGCTCGGCGC GCCCGAGGCG GCCGTCGGCA TCGTGATCGC CGCGCTCGTG
CTGCTGCCGG AAGGGCTCGC CGCCGTCGGC GCGGCGCGCG CGAACCGGCT GCAGACGAGC
ATGAACCTCG CGCTCGGCTC AGCGCTCGCG AGCATCGGCC TGACGATTCC GACCGTCGCC
GCCGTGTTCA TCTGGACGGG CGCGCCGCTC ACGCTCGGCA TCGGCGCAAT GGAGACGGTG
CTGCTGTCGC TCACGCTGCT CGTCAGCACG CTCACGCTCA GCCTGGGACG CACGACGGTG
CTGCACGGCG TCGTGCATCT GTCGCTGTTC GCCGCCTATC TGTTCCTGTC GATCACGCAC
TGA
|
|---|
| Protein sequence | MPDRLLESLL APCHDQGHSM PISSSALPRW TLVAPLAAWL VLALSRVVPA EGFAIAFVAA
ALAGAVFSAV HHAEVVAHRV GEPFGTLVLA IAVTVIEVAL IVSVMLSAGP EKAGLARDTV
FAAVMIVCNG IVGLCLLVGG WRHGEQDFQG RGATKALAVL ASLSVLSLVM PNYLSAAPGP
RLSTSQLAFA GVSSLVLYGV FVFVQTVRHR DYFLIDGSAD ESVHAVPPSG RTALTSIAFL
FVSLVAVVLL AKLLSPAVER TVLRLGAPEA AVGIVIAALV LLPEGLAAVG AARANRLQTS
MNLALGSALA SIGLTIPTVA AVFIWTGAPL TLGIGAMETV LLSLTLLVST LTLSLGRTTV
LHGVVHLSLF AAYLFLSITH
|
|---|
| |