Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0004 |
Symbol | rbmK |
ID | 3693291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 21862 |
End bp | 23304 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637730258 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_335163 |
Protein GI | 76818207 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCCG AGATTTCCGG CAAACGGCGC TGGTATGCGC TCGTCGTTCT GTGTCTGGGC GTGCTGATGA TCGTGCTCGA CACGACCATC GTGAACGTCG CGCTGCCGTC GATCGCGGCC GAGCTGCGTT TTTCCGAGAA CGCGCTCGTC TGGGTCGTCA ACGCCTACAT GCTGACGTTC GGCGGCTGCC TGCTGCTCGG CGGCAGGCTC GGCGACCTGT ACGGGCACCG GCGCCTCTTC CTGGCCGGCG TGACGGTGTT CACGGCCGCG TCGCTCGCCT GCGGGCTCGC GCAGACGCAA CTCGTGCTGA TCGCCGCGCG CGCCGCGCAG GGCATCGGCG GCGCGGTCGT CTCCTCGGTC GCGCTGTCGC TCATCATGAC GCTGTTCGTC GAGCCGGGCG ACCGGGCGAA GGCGATGGGC GTCTACGGCT TCGTCTATGC GGGCGGCGGC AGCCTCGGCG TGCTGCTCGG CGGGCTCCTG ACGAGCGCGT TGAGCTGGCA CTGGGTCTTT CTCGTCAACC TGCCGCTCGG CGCCGTGGTC TATCTGCTGT CGTCGGCGCT GCTGCCGAAG GCGCGCGCGC AGGCAACGCG CGCGCCGCTC GACATCGCCG GCGCCGTGAC CGTGACCGCC GCGCTGATGT TGGCCGTCTA CGCGGTGGTG AACGGCAACG CGGCCGGCTG GCTGTCCGCG CGCACGCTGA GCTGGCTCGG CGGCGCGGCG GCGCTGTTCG CCGCGTTCGT CGCGATCGAG GCGCGCGTCG CGCATCCGCT GATGCCGCTC GCGCTCTGCA TGAAGCGCAA CGTCGCGATC GCGAACCTGA TCGGCATCCT GTGGGCCGCC GCGATGTTCG CGTGGTTCTT CCTCGCCGCG CTGTATCTGC AGCGCGTGCT CGGCTACGGG CCGTTGCAGA TCGGCCTCGC GTTCCTGCCG GCGAACCTGA TCATGGGCGT GTTCTCGCTC ATCGTCTCCG CGCTGCTCGT GGTGCGCTTC GGGATCCGCG TGCCGATCGC GGCCGGACTG CTCGCGGCGG CGGCCGGCCT GATGCTGTTC GCTCGGGCGC CCGTCGGCGG GGACTTCGTC GCCGACGTGC TGCCGGGCAT GATCCTGCTG GGCACCGGCG CGGGCATCGC GTTCAACCCG GTCCTGCTCG CGGCGATGAG CGGCGTCGAT CCGGCGGACT CGGGGCTCGC CTCGGGCATC GTCAACACGT CGTTCATGAT GGGCGGCGCG CTCGGCCTCG CGGTGCTCGC GAGCGTCGCG ACGGCGCGCA CCGATGCGCT GCTCGCCGCG CGCACGGCCG TGCCCGCCGC GATGGCGGGC GGCTACCATG CGGCGTTCAT GCTCGGTGCG GCGTTCGCGA TCGTCGCCGC GCTGATCGGG ATGCGGCTGC GGGCCGCCCC GAATCCGGCG GCGATGCAGG GGCTGCAAGG CGCGACGCAG TAG
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Protein sequence | MTSEISGKRR WYALVVLCLG VLMIVLDTTI VNVALPSIAA ELRFSENALV WVVNAYMLTF GGCLLLGGRL GDLYGHRRLF LAGVTVFTAA SLACGLAQTQ LVLIAARAAQ GIGGAVVSSV ALSLIMTLFV EPGDRAKAMG VYGFVYAGGG SLGVLLGGLL TSALSWHWVF LVNLPLGAVV YLLSSALLPK ARAQATRAPL DIAGAVTVTA ALMLAVYAVV NGNAAGWLSA RTLSWLGGAA ALFAAFVAIE ARVAHPLMPL ALCMKRNVAI ANLIGILWAA AMFAWFFLAA LYLQRVLGYG PLQIGLAFLP ANLIMGVFSL IVSALLVVRF GIRVPIAAGL LAAAAGLMLF ARAPVGGDFV ADVLPGMILL GTGAGIAFNP VLLAAMSGVD PADSGLASGI VNTSFMMGGA LGLAVLASVA TARTDALLAA RTAVPAAMAG GYHAAFMLGA AFAIVAALIG MRLRAAPNPA AMQGLQGATQ
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