| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3590 |
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| Symbol | gabP |
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| ID | 3689570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 3913481 |
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| End bp | 3915106 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637730045 |
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| Product | GABA permease |
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| Protein accession | YP_334955 |
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| Protein GI | 76808987 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.566491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACGA CAGGCGCGCC GCGATGCGCC GCCGCGATGC GCGGCGCATC GCGAACGCAG
CCTCGCAGAC CTGCGTGGCG CACCTGTCCG GGCGGCCGCA GGCATGACGT CCGATCGGCG
CGCGGCGCGC ATTGCGCCGC GCACGGTTCG ATAACAACAA AGCCCCCGCG CCGCCTTCAT
GCGATGCCCG GTCACGCCGG AACCGTTTTT TTGGAGGGAG ACATGGAAGG AAGTCAGACA
GGCCTCGGAA CCGGCCTGAA GCAGCGTCAC GTCACGATGC TGTCGATCGC GGGCGTGATC
GGCGCCGGGT TGTTCGTCGG TTCGGGGCAT GCGATCGCGG AGGCCGGGCC GGCCGCGCTG
ATCGCGTACG CGATCGCGGG GCTGCTCGTC GTGCTCGTGA TGCGCATGCT CGGCGAGATG
GCGGTTGCGC AGCCGGACAG CGGTTCGTTC TCGACCTACG CCGATCGCGC GATCGGCCAT
TGGGCGGGCT TCACGATCGG CTGGCTCTAC TGGTGGTTCT GGGTGCTCGT GATTCCGATC
GAGGCGACGG CCGCCGCGAC GATCCTCAAT GCGTGGTTTC CCGGCGTCGC GACGTGGATC
TTCGCGCTCG GCATCACGTC GGTGCTCACC GTCACGAATC TCTTCTCGGT CAAGAACTAC
GGCGAATTCG AATTCTGGTT CGCGCTCATC AAGGTGGTGG CGATCGTGGT GTTCCTCGCG
ATCGGCGGCG CGGCGATCGT CGGCCTGCTG CCGGGTTCGA ACGTGTCGGG CGCGGCGCGC
CTCGTGAACG CGGGCGGCTT CATGCCGAAC GGCGTCGGCG CGGTGCTCGC CGCGATGCTG
ACGACGATGT TCTCGTTCCT CGGCACCGAG ATCGTCACGA TCGCCGCGGC CGAATCCGAG
CATCCGGAGC GCCAGATCGT CCGCGCGACG AATTCGGTGA TCTGGCGCAT CTCGCTGTTC
TATCTCGGCT CGATCTTCGT CGTCGCGGCG CTCGTGCCGT GGAACGACGC GCTGCTGCCC
GCGCACGGCT CGTATCAGCG CGCGATGGAG CTGATCGGCG TGCCGCACGC GAAGGGCATC
ATCGACGTGA TCGTGCTGGT GTCGGTTGCG AGCTGCCTGA ATTCGGCGCT CTACACGGCG
TCGCGCATGA TCTTCTCGCT GTCGACGCGC GGCGACGCGC CGGCATTCTT GCGCCGCACC
GATGCAAGCG GCACCCCGCG CGCGGCGGTG CTCGCGTCGA CGGCGTTCGG CTTTCTGACG
GTGATCGCGA ACTACGTGAT GCCCGAGCAG GTGTTCGGCT TCCTGCTCGC GACGTCGGGC
GCGATCGCGC TGCTCGTCTA TCTCGTGATC GCGATCTCGC AACTGCGGAT GCGCTCGACG
CTCGACGCGA CGGGCGAGCG CCTGCCGCTG CGGATGTGGT GCTTTCCGTG GCTCACGTGG
GCGGTGATCG TGTTCATCTG CGGCGTGCTC GTCGTGATGC TGCTGCGCGA GGATCACCGG
ATGGAAGTCG GCGCGACCGC GGTGCTTGCG CTCGCCGTCG TCGTCGCATC GCGGATGAAC
CGGCGCGCGC GCGGCGGCGA CGAGCCGACG CCCGCCGCGT CGCGAGTGTC CGCTAACCTG
CGGTGA
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| Protein sequence | MPTTGAPRCA AAMRGASRTQ PRRPAWRTCP GGRRHDVRSA RGAHCAAHGS ITTKPPRRLH
AMPGHAGTVF LEGDMEGSQT GLGTGLKQRH VTMLSIAGVI GAGLFVGSGH AIAEAGPAAL
IAYAIAGLLV VLVMRMLGEM AVAQPDSGSF STYADRAIGH WAGFTIGWLY WWFWVLVIPI
EATAAATILN AWFPGVATWI FALGITSVLT VTNLFSVKNY GEFEFWFALI KVVAIVVFLA
IGGAAIVGLL PGSNVSGAAR LVNAGGFMPN GVGAVLAAML TTMFSFLGTE IVTIAAAESE
HPERQIVRAT NSVIWRISLF YLGSIFVVAA LVPWNDALLP AHGSYQRAME LIGVPHAKGI
IDVIVLVSVA SCLNSALYTA SRMIFSLSTR GDAPAFLRRT DASGTPRAAV LASTAFGFLT
VIANYVMPEQ VFGFLLATSG AIALLVYLVI AISQLRMRST LDATGERLPL RMWCFPWLTW
AVIVFICGVL VVMLLREDHR MEVGATAVLA LAVVVASRMN RRARGGDEPT PAASRVSANL
R
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