| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_3555 |
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| Symbol | opcP |
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| ID | 3690421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 3875865 |
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| End bp | 3877175 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637730010 |
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| Product | outer membrane porin |
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| Protein accession | YP_334925 |
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| Protein GI | 76809290 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.525449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCGCG CGTGTACCGC TCTTTCTCTT TGTCCCAAAA AGTCCTTTTG CTACATTACG
AGCGGCTTCA TTCGAAGTTC ACGCGGGCAT CGCCATCAAA AACAATCATC AGCCCGCCAC
AATAAATTTG TCATCCTTGG AGATCTTTTA ATGAAAAAGT CGCTTCTCGC GCTCGTCGCG
CTGAGCGCGT TTGCTGGCGC GGCTCATGCG CAAAGCAGCG TGACGCTGTA CGGCATCATC
GACGAAGGCT TCAACATCAA TACCAATGCA GGCGGCAAGC ACCTGTACAA CCTGTCGAGC
GGTGTCATGC AGGGTAGCCG TTGGGGCCTG CGCGGCACGG AAGACCTGGG CGGTGGCCTG
AAGGCGCTGT TCGTCCTCGA AAACGGCTTC GACGTGAACT CGGGCAAGCT GAACCAGGGC
GGCCTCGAAT TCGGCCGTCA AGCGTACGTC GGCCTGTCGA GCGGCTTCGG CACCGTCACG
CTCGGCCGTC AGTACGACTC CGTCGTCGAC TTCGTCGGCC CGCTGGAAGC CGGCGACCAG
TGGGGCGGCT ACATCGCCGC TCACCCGGGC GATCTCGACA ACTTCAACAA CGCATATCGC
GTGAACAACG CAGTCAAGTT CACGAGCGCG AACTACGGCG GCTTCACGTT CGGCGGCCTG
TACAGCTTCG GCGGCGTCGC CGGCGACTTC AGCCGCAACC AGACCTGGTC GCTCGGCGCG
GGCTACACGA ACGGCCCGCT CGTGTTGGGC GTCGGCTACC TGAACGCGCG CACGCCGTCG
ACGGCTGGCG GCCTGTTCGG CAACAACACG ACGTCGAGCA CGCCGGCTGC CGTGACGACC
CCGGTCTACG CGGGCTATGC GTCGGCCCAT ACGTACCAGG TGATCGGTGC GGGCGGCGCC
TATTCGTTCG GCGCGGCGAC GGTCGGCATC ACGTACTCGA ACATCAAGTT CATGAACTTC
GCGAGCACGG TGTTCCCGAA CCAGACCGCG ACGTTCAACA ACGCGGAAAT CAACTTCAAG
TATCAGTTGA CCCCGACGCT GCTCGCCGGC GCGGCGTATG ACTACACGCA AGGCAGCAAG
ATCGCCGGCT CGTCCGCGGC CAAGTATCAC CAAGGCTCGG TCGGCGTCGA CTACTTCCTG
TCGAAGCGCA CCGACGTCTA CGCGATCGGC GTGTATCAGC ACGCTTCGGG TAACGTGATC
GAAGCCGACG GCAACACGGT CGGCCCGGCG ACCGCCGCGA TCAACGGCCT GACGCCGTCG
TCGAACCGCA ACCAGTTCGC AGCGCGCGTC GGCATCCGCC ACAAGTTCTA A
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| Protein sequence | MGRACTALSL CPKKSFCYIT SGFIRSSRGH RHQKQSSARH NKFVILGDLL MKKSLLALVA
LSAFAGAAHA QSSVTLYGII DEGFNINTNA GGKHLYNLSS GVMQGSRWGL RGTEDLGGGL
KALFVLENGF DVNSGKLNQG GLEFGRQAYV GLSSGFGTVT LGRQYDSVVD FVGPLEAGDQ
WGGYIAAHPG DLDNFNNAYR VNNAVKFTSA NYGGFTFGGL YSFGGVAGDF SRNQTWSLGA
GYTNGPLVLG VGYLNARTPS TAGGLFGNNT TSSTPAAVTT PVYAGYASAH TYQVIGAGGA
YSFGAATVGI TYSNIKFMNF ASTVFPNQTA TFNNAEINFK YQLTPTLLAG AAYDYTQGSK
IAGSSAAKYH QGSVGVDYFL SKRTDVYAIG VYQHASGNVI EADGNTVGPA TAAINGLTPS
SNRNQFAARV GIRHKF
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