Gene BURPS1710b_3349 details

Gene Information

• Locus tag: BURPS1710b_3349
• Symbol: phnD
• ID: 3688447
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: -
• Start bp: 3670179
• End bp: 3671174
• Gene Length: 996 bp
• Protein Length: 331 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637729804
• Product: phosphonate ABC transporter, periplasmic phosphonate-binding protein
• Protein accession: YP_334720
• Protein GI: 76811915
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component
• TIGRFAM ID: [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein; [TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCTGA TCCGCTCTCT CGTCGCCTGC GTGGCCGCGC TCGCGTGCGC CGCCGCCGCC 
CATGCGCAAA CGCTGAACTT CGGCATCATC TCCACCGATT CGTCGGCGGT GCTCAAGCGC 
CGCTGGCAAC CGCTCATCGA CGACATGAAC CGCAAGACGG GCCTCGACGT GAAGGCGTTC 
TTCGCGACCG ACTACGCGGG CATCATCGAG GGCATGCGCT TCAACAAGGT ACAGCTCGGC 
TACTTCGGCA ACGCGTCGGC GCTCGAGGCG GTCGAGCGCT CGAACGGCGA GGTGTTCGCG 
AAGCTTCGCC ACGCGAACGG CGAGACCGGC TACTACTCGG TGCTGATCAC GAACGCGAAC 
AGCCGCTTCA GGACGCTTGA CGACGTGTTC AGGAACCCGA AGGACGTGAC GCTCGGCTTC 
GGCGATCCGA ACTCGACGTC CGGCACGCTC GTGCCCGCGT ACTATCTGTT CGCGCCGCGC 
GGCATAGCGC CGCGCACCGC GTTCAGGACG GTGCTGCCGT CGAGCCACGA GGGCAATCTG 
CTCGCGGTCG TCAACGACAA GATCGACATC GCGACGAACA ACACCGACGT GCTCGGCATG 
CTGAAGAAGC AGCATCCGGA TCAATACGCG CGGGTGCGCG TGCTGTGGAC ATCGCCGCAG 
ATCGCATCCG ATCCGCTCGT GTGGCGCAAG GATCTGCCCG ACGCGACCAA GCAGAAGCTG 
CGCGATTTCT TCTACAACTA CGCGAAGACC GATCCGCACG AGCAGGCGGT AATGGCGGGC 
ATTCGCAATC TGGTCGGCTT CGCGCCGTCG TCGGATGCGC AACTGATCCC CGTGCGCAAG 
ATCGTGCTGT TCCAGCAGAA GCAGAAGATC GAGACGGACA TGGCGCTGTC GGCCGATGCG 
CGCCGCGCGC AGCTCGCGGC GCTCGATGCG AGGCTCGCCG CGCTCGACGC GTCCGGCGCG 
GCGGATGCGT CGAGCGCGCA GGCGGACAAG CGATGA 

 

Protein sequence

MKLIRSLVAC VAALACAAAA HAQTLNFGII STDSSAVLKR RWQPLIDDMN RKTGLDVKAF 
FATDYAGIIE GMRFNKVQLG YFGNASALEA VERSNGEVFA KLRHANGETG YYSVLITNAN 
SRFRTLDDVF RNPKDVTLGF GDPNSTSGTL VPAYYLFAPR GIAPRTAFRT VLPSSHEGNL 
LAVVNDKIDI ATNNTDVLGM LKKQHPDQYA RVRVLWTSPQ IASDPLVWRK DLPDATKQKL 
RDFFYNYAKT DPHEQAVMAG IRNLVGFAPS SDAQLIPVRK IVLFQQKQKI ETDMALSADA 
RRAQLAALDA RLAALDASGA ADASSAQADK R