Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3300 |
Symbol | wcbD |
ID | 3690022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 3612305 |
End bp | 3613702 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637729755 |
Product | WcbD |
Protein accession | YP_334671 |
Protein GI | 76811486 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3524] Capsule polysaccharide export protein |
TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0873208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGATATG TATTCAATTC GTGGCGTTTC CTGCTCGAAA CCGGCGACGG TCAGGTGCGC CTGCGCATTC AATCGGAATT CGAGGGTACG GACCTCGAGC ATCGCCAACT CGTCTTGAGA TATTTGCTGA CCGATGCGCG CGCATCGTCC ATTTCCGTCG ACGAATTGCT TCCCGCGTCA TCGCCATACT CGGTGGACGC GGCGGAACTG GTTGATAATC CTTCGTCCGT CGTGTCGAAA CGAGCCACCA TGGAGAGCTT CGATGCTCCG GCGCAGGAGT CGTCATGGTT CTGGCGGGTA TGGACGATCG GGCGGCTGAG GCTGACCCCG TTGTTTCTGG TGACGGTGGT GCTGCCGACT GCAATCGCTA CCCTCTACTA CGGGCTGATT GCGTCGGATG TCTACATCTC GGAATCGCAG TTTATCCTGC GTACGCCCAA GCGAACGAGC GAACCGGGTT TGGGGGCATT GCTTCAGGGC GTCTCCCTAT CAAAGACCAG TGACGACACC AGTGTCGTTC AAGATTACAT AAAGTCGAGA GACGCACTCG TCGTTCTCGA GCAGAAAATG CCGCTCAGAG ATGCATTTGG CGGTCGCTAT GCTGATATCT TCAGTCGATT CCCGGGCGTG ATCGGGCGCG ATGGCTTCGA GTATTTCTAC CGCTATTTCA AAAACCATGT TGCCGTCGAC GTAGGGACTG CAACTGCGGT CACTACGCTA CGCGTTCAGG CCTATACGTC GAAAGACGCA TACCTGATCA ACAAGTATTT GCTCGAGATG GCGGAGAAGC GAGTCAATGA ACTCAACGAT CGCTCACGTC AGGATTCGCT CCGTTACGCC CTTGCGGAGG TGGCGGGAGC GGAAGCGAAG GTAAAGGCTG CGTCGACGGC GTTGTCGAAA TTCCGAAGCA AGGCGAGTCT GTTCGATCCG GATCGGCAGT CCAATATCCA ACTGGAACTG GTAGCGAAGT TGCGGGGCGA GCTCATTGCC AAGCAGGCGC AGCTATCGCA ATTGCGCATG CTCAGCCCGC AGAATCCGCA GATCCCGAGT CTGGCCGCGT CTATCGGCGC GTTGGAAGCG TCGATTGCGA GCGAGAAAGG GGGCGTGGCG GGAGAGAAGA ATTCGTTGTC GGACCGTTCG GTCGAGTACC AGCGCCTGGC TTTGGAGCAA TCGTTCGGGG AGAAGCTTCT TGCCTCTGCG CTGACATCGT TGGAGCAAGC CAGGGCAGAT GCGGAAAGAA AACAAATCTA TCTGGAACGG GTTGCGGAAC CGAACGAACC GGACGTGGCG ATGGAACCCA AGCGTGTCCG GAACATATTT GCCTGTTTCA TTTTGGGGCT CGCGGCCTGG GGCGTGTTGA GCATGCTGGT AGCGGGTATT CGTGAACATC AGGAATGA
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Protein sequence | MGYVFNSWRF LLETGDGQVR LRIQSEFEGT DLEHRQLVLR YLLTDARASS ISVDELLPAS SPYSVDAAEL VDNPSSVVSK RATMESFDAP AQESSWFWRV WTIGRLRLTP LFLVTVVLPT AIATLYYGLI ASDVYISESQ FILRTPKRTS EPGLGALLQG VSLSKTSDDT SVVQDYIKSR DALVVLEQKM PLRDAFGGRY ADIFSRFPGV IGRDGFEYFY RYFKNHVAVD VGTATAVTTL RVQAYTSKDA YLINKYLLEM AEKRVNELND RSRQDSLRYA LAEVAGAEAK VKAASTALSK FRSKASLFDP DRQSNIQLEL VAKLRGELIA KQAQLSQLRM LSPQNPQIPS LAASIGALEA SIASEKGGVA GEKNSLSDRS VEYQRLALEQ SFGEKLLASA LTSLEQARAD AERKQIYLER VAEPNEPDVA MEPKRVRNIF ACFILGLAAW GVLSMLVAGI REHQE
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