Gene BURPS1710b_3195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3195 
SymbolfrnF 
ID3689580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3502398 
End bp3503840 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content72% 
IMG OID637729650 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_334567 
Protein GI76811512 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.88533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCACG GTCTGCACGG CCCCAAGCGC TGGTATGCGC TCGTCGTTCT CTGTCTGGGC 
GTGCTGATGA TCGTGCTCGA TTCGACGATC GTCAACGTCG CGCTGCCGTC GATCGGCGCG
GACCTGCACT TCACCGAAAC CGCGCTCGTC TGGATCGTGA ACGCTTACAT GCTGACGTTC
GGCGGCTGCC TGCTGCTGGG CGGCCGGCTC GGCGATCTGT ACGGCCAGCG CCGGATGTTC
CTCGCCGGCC TCACGCTGTT CACGCTCGCA TCGCTCGCGT GCGGGCTCGC GCCAACGCAG
TTCGTGCTGA TCGCCGCGCG CGCGGTGCAG GGGTTCGGTG GCGCGGTGGT GTCCGCCGTC
GCGCTGTCGC TCATCATGAA TCTCTTCACC GAGCCGGGCG AGCGCGCGAA GGCGATGGGC
GTCTACAGCT TCGTCTGCGC GGGCGGCGGC AGCCTCGGCG TGCTGCTCGG CGGCGTCCTC
ACGAGCGTGC TCAGCTGGCA CTGGATCTTC CTCGTCAATC TGCCGATCGG CGTCGCCGCG
TACGCGCTGT CCGCCGCGCT GCTGCCGAAG GTGCGCCCGC AGGCGGCCGA CGCGCGGCTC
GACGTCGCGG GCGCGATCGC CGTGACCGCT TCGCTGATGC TCGCCGTCTA CGGCATCGTC
AACGGCAACG AGACCGGCTG GCTGTCGACG CAGACGGTCG CGACGCTCGC AGGCGCGGCC
GCGCTGCTCG CGGCGTTCAT CGCGATCGAG ACGCGCGCCG CGCATCCGCT GATGCCGCTC
GCGCTCGCCA CGCAGCGCAA CGTCGCGGTC GCGAACGTGA TCGGCGTGCT GTGGGCGGCC
GCGATGTTCG CGTGGTTCTT TCTCTCCGCG CTCTACATGC AGCGCGTGCT CGGCTACGGG
CCGCTCCAGG TCGGCCTGGC GTTTCTGCCC GCGAACCTGA TCATGGCCGC GTTCTCGCTC
GGCTTGTCCG CGAGGATCGT GATGCGCTTC GGCATCCGCC GCGCGATCGG CGCCGGGCTC
GTCATCGCGG CCGCGGGCCT TGCCCTCTTC GCGCGTGCAC CCGCCGACGG CGGCTTCGTC
GCGCACGTGC TGCCGGGGAT GATACTCGTC GGCGTCGGCG CGGGCGTCGC GTTCAATCCG
GTGCTGCTCG CCGCGATGAG CGACGTCGCG CCGAGCGATT CGGGGCTTGC CTCGGGCATC
GTCAACACCT CGTTCATGAT GGGCGGCGCC CTCGGCCTCG CGGTGCTCGC GAGCGTCGCG
TCCGCGCGCA CCGACGCGCT CGCCGCCGCG CGCGCGGCGC TGCCCGTCGC GCTCAACGGC
GGCTATCACG CGGCGTTCGC GTGCGGCGCG GCATTCGCGG CGCTGGCCGC CGGTCTCGCG
TACGCGCTGC GCATCCGCGC GCAATCGAAC GCCGCGGCCG AACTGCACGG CGCCGCGCAC
TGA
 
Protein sequence
MTHGLHGPKR WYALVVLCLG VLMIVLDSTI VNVALPSIGA DLHFTETALV WIVNAYMLTF 
GGCLLLGGRL GDLYGQRRMF LAGLTLFTLA SLACGLAPTQ FVLIAARAVQ GFGGAVVSAV
ALSLIMNLFT EPGERAKAMG VYSFVCAGGG SLGVLLGGVL TSVLSWHWIF LVNLPIGVAA
YALSAALLPK VRPQAADARL DVAGAIAVTA SLMLAVYGIV NGNETGWLST QTVATLAGAA
ALLAAFIAIE TRAAHPLMPL ALATQRNVAV ANVIGVLWAA AMFAWFFLSA LYMQRVLGYG
PLQVGLAFLP ANLIMAAFSL GLSARIVMRF GIRRAIGAGL VIAAAGLALF ARAPADGGFV
AHVLPGMILV GVGAGVAFNP VLLAAMSDVA PSDSGLASGI VNTSFMMGGA LGLAVLASVA
SARTDALAAA RAALPVALNG GYHAAFACGA AFAALAAGLA YALRIRAQSN AAAELHGAAH