Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_3043 |
Symbol | opcP1 |
ID | 3690261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 3356318 |
End bp | 3357457 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637729498 |
Product | outer membrane protein |
Protein accession | YP_334420 |
Protein GI | 76809014 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000337977 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA CCCTCATCGT TGCCGCTCTT TCCGGCGTTT TCGCAACGGC CGCTCACGCG CAAAGCAGCG TGACGCTGTA CGGCCTGATC GACGCCGGCA TCACCTACAC GAACAACCAA GGCGGCCACA GCGCATGGTC GCAATCCACC GGCTCGGTCA ACGGCAGCCG CTGGGGCCTG CGCGGCGCCG AGGATCTCGG CGGCGGCCTG AAGGCGATTT TCGTGTTGGA AAACGGCTTC GGCATCAATA ACGGCACGCT GAAGCAGAAC GGCCGCGAGT TCGGCCGTCA GGCGTTCGTC GGCCTGTCGC ACGAGCAATA CGGCGCGCTG ACGCTCGGCC GTCAATACGA CAGCGTCGTC GACTACCTCG GGCCGCTGTC GCTGACGGGC ACGCAATTCG GCGGCACGCA GTTCGCCCAC CCGTTCGACA ACGACAACCT GAACAATTCG TTCCGGATCA ACAACGCGGT CAAGTACACG AGCGTGAACT GGGCGGGCCT GAAATTCGGC GCGTTGTACG GCTTCTCGAA CAACAATCAG TTCGCGAACA ACCGCGCCTA TAGCGCGGGC GTATCGTACA GCTACGCCGG CTTCAACATC GGCGCCGGCT ACCTGCAGTT GAACAACAAC TTCGGCCCGA CGGTCTCCAA CGCATCCGGC GCGGTCGCGC TCGACAACAC GTTCGTCGGC AAGCGCCAGC GCGTGTTCGG CGGCGGCCTG AACTACACGT TCGGCCCGGC AACGGCCGGC TTCGTGTTCA CGCAATCGCG CGTCAACCGC GCGACGGCAA TCGGCGCGGG CGCATCGGGC GTGTCGAGCG GCATTGCGCT CGACGGCACG TTCATGCGCT TCAACAACTA CGAAGTGAAC GCGCGCTACG CGATCACGCC GGCATGGACG GTGGCCGGTT CGTACACGTA CACCGCCGGC TTCATCGAGA ACCACCACCC GGGCTGGAAC CAATTCAACC TGCAAACGGC CTACGCGCTG TCCAAGCGCA CGGACATGTA CCTGCAAGGC GTGTATCAGA AGGTCAACAA CGACGGCACG GGCCTCGGCG CGTACATCAA CGGTATCGGC GGCATGTCGT CGACGGAAAA ACAGATCGCC GTCACGGCCG GCCTGCGTCA CCGCTTCTAA
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Protein sequence | MKKTLIVAAL SGVFATAAHA QSSVTLYGLI DAGITYTNNQ GGHSAWSQST GSVNGSRWGL RGAEDLGGGL KAIFVLENGF GINNGTLKQN GREFGRQAFV GLSHEQYGAL TLGRQYDSVV DYLGPLSLTG TQFGGTQFAH PFDNDNLNNS FRINNAVKYT SVNWAGLKFG ALYGFSNNNQ FANNRAYSAG VSYSYAGFNI GAGYLQLNNN FGPTVSNASG AVALDNTFVG KRQRVFGGGL NYTFGPATAG FVFTQSRVNR ATAIGAGASG VSSGIALDGT FMRFNNYEVN ARYAITPAWT VAGSYTYTAG FIENHHPGWN QFNLQTAYAL SKRTDMYLQG VYQKVNNDGT GLGAYINGIG GMSSTEKQIA VTAGLRHRF
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