| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2917 |
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| Symbol | rluC |
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| ID | 3689348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 3224148 |
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| End bp | 3225581 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637729373 |
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| Product | ribosomal large subunit pseudouridine synthase C |
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| Protein accession | YP_334298 |
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| Protein GI | 76810444 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00370322 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGGC TCGGCCGCAG CGGGGAGTAT CGAATCCAGC CCGACTTTCC CGCCTGGGGT
GTTCCTTCCT TGGTTTTGAC GTCGCCAAGC TCCGCGCTCT CGCGGGGCCA TATCGGGCGC
ACGCCGTTCT ATTCGCAACA GGAGGCTGCG CCGGGCCTAC ATCGTGCCGC GCCGCAGCCG
CCAACAAATT CTTTTTGTCC AACATTCCGT TACCGCGGCA CGGCTCAAAC CGAATCCGCC
TGTGGGCGCG ATCCCTGCCT GAGCGGGGTG CCGTGCGTGC AACTTGCTGC TTTCATTCAT
GAGGACGAGC AGCACGCCCC GGGCGCAAGT AAAATAACAG TTTGCGCTTG CGCCTCGCGC
AGTCCGCCCG AAAACCGGCC GATCAGGCCG CTCCGCTACG GAAGGCTGCG CAAAATTATA
TTCAGTATGA ATGAGTTAGG CAAAAAATCC CATAATTCGG TCGCAAGCGG TCAGGTTTCG
CTCATCGAGA TCGACGAAAG CGCGGCCGGG CAGCGCATCG ACAACTTCCT GCTGCGCGTC
TGCAAGGGCG TGCCGAAGAG TCATATTTAC CGGATTCTGC GCAGCGGCGA AGTCCGCGTG
AACAAGGGCA GGATCGATGC GCAGTACCGG CTCGCGTTCG GCGACGTCGT GCGCGTGCCG
CCCGTGCGCG TCGCGGCGGC GGACCTCGCG CGCGCGGCCG GCCCGGCGCC CGTGCCCGCC
GCGGAATTCG AGATCCTGTT CGAGGACGAC GCGATCATCG TGCTGAACAA GCCGGCGGGC
GTCGCCGTGC ACGGCGGCAG CGGCGTCGCG TTCGGCGTGA TCGAGCAGAT GCGCCATGCG
CGGCCGCACG CGAAATTCCT CGAACTCGCG CACCGGCTCG ACCGCGAGAC CTCGGGCATC
CTGATGCTCG CGAAGAAGCG CTCGGCGCTC GTCGGGCTGC ACGAGCAGAT TCGCGAGAAC
CGGATGGACA AGCGCTACTT CGCCTGCGTG CATGGCGATT GGGCGGCCGA CTGGGGCCGC
CGCCGCGTGG TGAAGGCGCC CCTTTTCAAG TACGCGACGC CCGACGGCGA GCGGCGCGTG
CGGGTTCAGG AGGACGGCCT GCCGTCGCAC ACGGTGTTCA ATCTCGTCGA CCGCTGGCCG
GACTACGCGC TCGTCGAAGC GGAACTCAAG ACGGGGCGGA CCCATCAGAT CCGCGTGCAC
CTCGCGCATC TCGGCCTGCC GATCGTCGGC GACGCCAAGT ACGGCGATTT CGCGCTGAAC
AAGGCGCTTG CGCGCGCGAA CGCGGTGCCG TCGATCAAGC GGATGTTCCT GCACGCGCAT
CGGCTGCGCC TCGCGCATCC GCTGACGGGC GAGCCGCTGC AGTTCGACGC GCCGCTGCCC
GCCGAGTGCC GGCAATTCAT CGATCAACTC TCCGACTTGC GCGACACCGC GTGA
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| Protein sequence | MLRLGRSGEY RIQPDFPAWG VPSLVLTSPS SALSRGHIGR TPFYSQQEAA PGLHRAAPQP
PTNSFCPTFR YRGTAQTESA CGRDPCLSGV PCVQLAAFIH EDEQHAPGAS KITVCACASR
SPPENRPIRP LRYGRLRKII FSMNELGKKS HNSVASGQVS LIEIDESAAG QRIDNFLLRV
CKGVPKSHIY RILRSGEVRV NKGRIDAQYR LAFGDVVRVP PVRVAAADLA RAAGPAPVPA
AEFEILFEDD AIIVLNKPAG VAVHGGSGVA FGVIEQMRHA RPHAKFLELA HRLDRETSGI
LMLAKKRSAL VGLHEQIREN RMDKRYFACV HGDWAADWGR RRVVKAPLFK YATPDGERRV
RVQEDGLPSH TVFNLVDRWP DYALVEAELK TGRTHQIRVH LAHLGLPIVG DAKYGDFALN
KALARANAVP SIKRMFLHAH RLRLAHPLTG EPLQFDAPLP AECRQFIDQL SDLRDTA
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