Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2671 |
Symbol | |
ID | 3690402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 2961578 |
End bp | 2964724 |
Gene Length | 3147 bp |
Protein Length | 1048 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637729127 |
Product | AcrB/AcrD/AcrF family protein |
Protein accession | YP_334058 |
Protein GI | 76809798 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGGA ACCTGTTCGC GGTGTTCATC CGCTACCCGG TCGCCACCTG CCTGATGACG GCGGGCATCC TGTTCGCGGG CGTGGCCGCG TATTTTCATC TGCCCGTCGC GCCGCTGCCG CAGGTCGAGT TCCCGACCAT CCAGGTTTCG GCCGTTCTGC CGGGCGCCGA TCCCGTATCG GTCGCCTCGA CGCTCGCGCA GCCGCTCGAG ACGCAGTTCT CGAAGATTCC GTACGTCACG CAGATGACGT CGCAAAGCAC GCTCAGCTCG ACGTCGATCG TGCTGCAGTT CAGTCTCGAG CGCAGCATCG ACGCGGCCGC CAACGACGTG CAGTCCGCGA TCGACGCGGC GGCCGCGCAA TTGCCGGCGG ATCTCCCCTC GCCGCCGACG TTCCAGAAGG TCAACCCGGC CGACTCGCCG ATCATGCTGC TGAGCGCGAT ATCGTCGACG CTGCCGCTCA CGACGATCGA CGACTATGTC GAGACGCGAC TCACGAAAAG CCTGAGCCAG ATCGACGGCG TCGGCAGCGT GTCGATCGGC GGCCAGCAGA AGCCGTCGAT CCGCATCCAG CTCGATCCGG TCAAGCTCGC GTCGCGCGGG CTGTCGTCCG AGGACGTGCG CCGCGCACTG TCGGGGCTGT CGGGCGTGAA TCCGAAAGGC GTGTTCAACG GCACGACGCG CTCGTACACG ATCTACACGA ACGGGCAGCT GACCGAGCCG GCGCAGTGGA ACGACGCGAT CGTCGCGTAC CGGGACGGCA CGCCGGTGCG CATCCGCGAC ATCGGGCAAG CGGTGCTCGG CCCCGAGGAC AACACGCTCG CCGCATGGAT CGACGGCCGG CGCGCGATCT CGGTCGGCAT CTACAAGAAG CCCGGCGCGA ACACCGTCTC GACCGTCGAC AAGATCCGTG CCAGGCTGCC CGAACTCGAG GCGTCGCTGC CGCCGTCGCT GAAGATCGCC GTGCTGGCCG ACCGCACGCA GACGATCCGC GCATCGCTGC TCGACATCGA GCTCACGCTG CTGCTGAACG TCGTGCTCGT CGTCGTCGTG ATCTACGCAT TTCTCGGCAG CGTGCGCACG ACGATCATCC CGGCCGTCAC GGTGCCCGTG TCGCTGTTCG GCGCGTGCGC GCTGATGTGG GTGTGCGGGT ACAGCCTCGA CAACATCTCG CTGATGGCGA TGACGATCGC GGTCGGCTTC GTCGTCGACG ACGCGATCGT GATGGTCGAG AACATCGCGC GCCACGTCGA GGCCGGCGAG CGGCCGCTGC AGGCCGCGCT CAAGGGGCTG AGCGAAACGA GCTTCACGAT CGCGTCGATC AGCCTCTCGC TCGTCGCGGT GCTGCTGCCG CTGCTGCTGA TGAGCGGCAT CATCGGCCGC ATGTTCCGCG AGTTCGCCGT CACGCTGTCG ATGACGATCA TCGTGTCCGC GTTCGTCTCG CTGACGCTCA CGCCGATGAT GGCGTCGTAC CTGCTGCGCG CGCATCGCCA CGACGCAGGG CGCCCGCCGC GGCCCGGCCT CTTCGAGCGC GCGTTCGCGC GAACGGCGGC CGCGTACGAG CGCGCGCTCG ACGTCGCGCT GCGGCACCGT TTCGTCACGC TGTGCGCGTT CTTCGCGTCG GTCGCGGCCT CGGTGTTTCT CTACGTCGGG ATTCCGAAAG GCTTTTTCCC GCAGCAGGAC ACGGGCGTGA TCACCGGCAT TTCGGAGGCC GCGCAGACCA TTTCGGTCGA GGACATGGCG CGCCACTCGA TGGCGCTCGC GGCGATCATC CGCGCCGACC CCGCCGTCGA GCATTGTCAG ATGGCGGTCG GCGGCAGCGC GTATGCGGGC ACGACCGTGA ACAACGGCCG CTGGTACATC ACGCTGAAGC CGCGCGATCA GCGCGACGCC ACCGCCGACG AGGTGATCCG CCGGCTGCGG CCGCAGTTCG CGAAAGTGCC CGGCGTGCGC ATGTACCTGC AGGCCGCGCA GGACGTGATC ATCGGCGCGC GCCTCGCGCG CACCCAATAC CAGCTGACGC TGCAAAGCGC CGATGTCGGC GCGCTGACGA CGTGGGCGCC GCGCCTGCTC GCGCGGCTGT CCGGGCTGCC GCAGTTGCGC GATGTCGCGA GCGACCAGCA GGTGAACGGC TCGGCGCTCA GCGTCGCGAT CGACCGCGAT CAGGCCGCGC GTTACGGCCT CACGCCCGAG GCGATCGACG GCACGCTGTA CGACGCGTTC GGCTCGCGCC AGGTCGCGCA ATACTTTACG CAGTTGTCGA CCTACAAGGT CATCATGGAA ACGCTGCCGT CCCTGCAGCG CGACCCGGGC ACGCTCGACA GGATCTACAT GAAAGCGCCG TCGGGCGCGC TGGTGCCGCT GTCGTCGGTC GCGCGCTGGA CGACCGACAC GGTGCAGCCG CTGTCGGTCA ATCACCAGTC GCATTTCCCG TCGGTCACGA TCAGCTTCAA CCTCGCGCCG GGCGTCTCGC TCGGCGAGGC GACGGCCGCG ATCGAGGCCG CGCGGGCCTC GCTGCGCATG CCGCCCGCCG TCGTCGGCTC GTTCCAGGGC ACCGCTCAGG CGTTCCAGAG CACGCTCGCG ACGATGCCGA TGCTGATCCT GTCCGCGCTG ATCGTCGCGT ACCTGGTGCT CGGCGCGCTG TACGGCAGCT TCATCCATCC GTGGACGATC CTGTCGACGC TCCCGTCGGC CGGTGTCGGC GCGATCGCGA CGCTGTGGCT GTTCAAGTAC GACTTCAACC TGATCGCGCT GATCGGCGTG ATTCTCCTCA TCGGCATCGT CAAGAAGAAC GGAATCATGA TGGTCGACTT CGCGATCGCC GCGACGCGCG AGCGGAACAT GACATCGCTC GACGCGATCC GCAGCGCGTG CCTGCTGCGC TTGCGGCCGA TCATGATGAC GACGATGACC GCGCTGTTCG GCGCGCTGCC GCTCATGCTC ACGCCCGGCA TGGGATCGGA GCTGCGGCAG CCGCTCGGCT ACGCGATGGT GGGCGGACTG CTGGTGAGCC AGGTGCTCAC GCTGTTTACG ACGCCCGTCA TCTATCTGTA TCTCGATACG CTGTCGAACC GTCTGAAGGC GCGCTTGCGT CCGCTCGGCG CCGACATGCC GTCGAACGCG CACGTGGAGG GCGCGACCCA GGACTGA
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Protein sequence | MSRNLFAVFI RYPVATCLMT AGILFAGVAA YFHLPVAPLP QVEFPTIQVS AVLPGADPVS VASTLAQPLE TQFSKIPYVT QMTSQSTLSS TSIVLQFSLE RSIDAAANDV QSAIDAAAAQ LPADLPSPPT FQKVNPADSP IMLLSAISST LPLTTIDDYV ETRLTKSLSQ IDGVGSVSIG GQQKPSIRIQ LDPVKLASRG LSSEDVRRAL SGLSGVNPKG VFNGTTRSYT IYTNGQLTEP AQWNDAIVAY RDGTPVRIRD IGQAVLGPED NTLAAWIDGR RAISVGIYKK PGANTVSTVD KIRARLPELE ASLPPSLKIA VLADRTQTIR ASLLDIELTL LLNVVLVVVV IYAFLGSVRT TIIPAVTVPV SLFGACALMW VCGYSLDNIS LMAMTIAVGF VVDDAIVMVE NIARHVEAGE RPLQAALKGL SETSFTIASI SLSLVAVLLP LLLMSGIIGR MFREFAVTLS MTIIVSAFVS LTLTPMMASY LLRAHRHDAG RPPRPGLFER AFARTAAAYE RALDVALRHR FVTLCAFFAS VAASVFLYVG IPKGFFPQQD TGVITGISEA AQTISVEDMA RHSMALAAII RADPAVEHCQ MAVGGSAYAG TTVNNGRWYI TLKPRDQRDA TADEVIRRLR PQFAKVPGVR MYLQAAQDVI IGARLARTQY QLTLQSADVG ALTTWAPRLL ARLSGLPQLR DVASDQQVNG SALSVAIDRD QAARYGLTPE AIDGTLYDAF GSRQVAQYFT QLSTYKVIME TLPSLQRDPG TLDRIYMKAP SGALVPLSSV ARWTTDTVQP LSVNHQSHFP SVTISFNLAP GVSLGEATAA IEAARASLRM PPAVVGSFQG TAQAFQSTLA TMPMLILSAL IVAYLVLGAL YGSFIHPWTI LSTLPSAGVG AIATLWLFKY DFNLIALIGV ILLIGIVKKN GIMMVDFAIA ATRERNMTSL DAIRSACLLR LRPIMMTTMT ALFGALPLML TPGMGSELRQ PLGYAMVGGL LVSQVLTLFT TPVIYLYLDT LSNRLKARLR PLGADMPSNA HVEGATQD
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