Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2596 |
Symbol | dapE |
ID | 3688815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 2877843 |
End bp | 2878994 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637729052 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_333988 |
Protein GI | 76809105 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCCGAA ACATGTCCGC CACCCTTGCC CTCACCGAAC AGTTGATCGC GCGCGCGTCC GTCACGCCCG ACGATCAGCA CTGCCAGCAA TTGATGATCG AGCGCCTCGC CGCCCTCGGC TTCGAGTGCG AAACGATCGC GTCGCACGGC GTGACGAACT TCTGGGCCGT CAAGCGCGGC ACGGCCGGCC GCGCAGGCAA GCTGCTCGCG TTCGCGGGCC ATACCGACGT CGTGCCGACC GGCCCGCTCG AGCAGTGGCG CTCGCCGCCG TTCGTGCCGA CGCACCGCGA CGGCAAGCTG TACGGCCGCG GCGCGGCCGA CATGAAAACC TCGCTCGCGG GCTTCGTCGT CGCGGCCGAG GAGTTCGTCG CCGCGCATCC GCAGCACCGC GGCTCGATCG GTTTCCTGAT CACGAGCGAC GAGGAAGGCC CGGCCACCGA CGGCACCGTG AAAGTCGTCG AGGCGCTCGC CGCGCGCGGC GAGCGCCTCG ATTACTGCAT CGTCGGCGAA CCGACCTCGA CGGCGACGCT CGGCGACGTC GTGAAGAACG GCCGGCGCGG CTCGATGTCG GGCGAGCTCG TCGTCAAGGG CGTGCAAGGC CATATCGCGT ATCCGCATCT CGCGAAGAAC CCGATCCATC TGCTCGCGCC GGCGCTCGCC GAGCTCGCCG CCGAGCAATG GGACGAAGGC AACGAGTACT TTCCGCCGAC CACCTGGCAG GTGTCGAACC TGCGCGCGGG CACCGGCGCG ACGAACGTGA TTCCGGGCCA CGCCGATCTG CTGTTCAACT TCCGCTTCTC GACGGCGAGC ACGGTCGAGG GCCTGCAGGC GCGCGTGCAC GCGATCCTCG ACAGGCACGG GCTCGATTAC ACGCTGAACT GGTCGGTGAG CGGCCTGCCG TTCCTCACGC CGCGCGGCGA GCTGTCGAAC GCGCTCGACG CCGCGATCCG CGCGGAAACG GGCGTCTCGC CCGAGCTGTC GACGACGGGC GGCACGTCCG ACGGCCGCTT CATCGCGCGC ATCTGCCCGC AGGTGATCGA GTTCGGCCCG CCGAACGCGA GCATCCACAA GATCGACGAG CACATCGACG TGCGCTTCGT CGACCCGCTG AAGAACGTGT ACCGCCGCGT GCTCGAACAA CTGATCGCCT GA
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Protein sequence | MVRNMSATLA LTEQLIARAS VTPDDQHCQQ LMIERLAALG FECETIASHG VTNFWAVKRG TAGRAGKLLA FAGHTDVVPT GPLEQWRSPP FVPTHRDGKL YGRGAADMKT SLAGFVVAAE EFVAAHPQHR GSIGFLITSD EEGPATDGTV KVVEALAARG ERLDYCIVGE PTSTATLGDV VKNGRRGSMS GELVVKGVQG HIAYPHLAKN PIHLLAPALA ELAAEQWDEG NEYFPPTTWQ VSNLRAGTGA TNVIPGHADL LFNFRFSTAS TVEGLQARVH AILDRHGLDY TLNWSVSGLP FLTPRGELSN ALDAAIRAET GVSPELSTTG GTSDGRFIAR ICPQVIEFGP PNASIHKIDE HIDVRFVDPL KNVYRRVLEQ LIA
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