| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2592 |
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| Symbol | smc |
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| ID | 3689676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 2870418 |
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| End bp | 2874224 |
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| Gene Length | 3807 bp |
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| Protein Length | 1268 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637729048 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_333984 |
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| Protein GI | 76808719 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0653514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCAACGA AGTGCCGAGC GCGCGCGAAT GGGCGGGCGG CCTGTGCATC GTCGTCGCGA
CCCTGCTGTC GAGCCGCGTG CATCGCGCCC GCCCGGCCGA AGACGAACCG CGCGAGCCGC
GGGACGGCGC GCGCGCGATG GTATGATTGG CCCCATTCGC GGGGCCGACT GCTTGACAGC
ACGGCCCCGT TTTTCGAATC TTGGGCGTGC GGCGCGCGCG CGGGCCTTCC GGCCGAATCG
CGGCGCGCAA CGCAGGTTCC GAACCGTTTC ACTCTCTTTA CCACCGATAC CGCCGTGCGT
CTGAGCTCGA TCAAACTCGC TGGCTTCAAA TCTTTCGTCG ATCCCACGCA CTTCCAGGTT
CCAGGTCAAC TGGTCGGCGT GGTGGGCCCG AACGGGTGCG GCAAGTCCAA CATCATCGAC
GCCGTGCGCT GGGTGCTCGG CGAGTCGCGC GCCTCCGAGC TGCGCGGCGA GTCGATGCAG
GACGTGATCT TCAACGGCTC GACGACGCGC AAGCCCGGCA GCCGGGCGAG CGTCGAGCTG
ATCTTCGACA ACTCCGACGG CCGCGCGGCC GGCCAGTGGG GCCAGTACGG CGAGATCGCC
GTGAAGCGCG TGCTCACGCG CGACGGCACG TCGAGCTATT ACATCAACAA TCTGCCCGCG
CGGCGCCGCG ACATCCAGGA CATCTTCCTC GGCACGGGCC TCGGCCCGCG TGCGTACGCG
ATCATCGGGC AGGGGATGAT CGCGCGGATC ATCGAGGCGA AGCCCGAAGA GCTGCGCGTG
TTCCTCGAAG AGGCGGCGGG CGTGTCGAAG TACAAGGAGC GCCGCCGCGA GACCGAGAAC
CGGCTGCACG ACACGCGCGA GAATCTGACG CGCGTCGAGG ACATCGTCCG CGAGCTCGGC
GCGAATCTCG AGAAGCTCGA GGCGCAGGCG GTGGTCGCGA CGAAGTACAA AGAGCTCGTC
GCCGACGGCG AGGAGAAGCA GCGCCTGCTG TGGCTGCTGC GCAAGAACGA GGCGGCCGCC
GAGCAGGACA GGCAGCGCCG TGCGATCGGC GACGCGCAGA TCGAGCTCGA CGCGCAGACC
GCGAAGCTGC GCGAAGTCGA GGCGCAGCTC GAGACGCTGC GCGTCGCGCA CTATTCGGCG
AGCGACGCGA TGCAGGGCGC GCAGGGCGCG CTCTACGAGG CGAACGCCGA GGTGAGCCGG
CTCGAGGCGC AGATCAAGTT CATCGTCGAG TCGCGCAACC GCGTGCAGGC GCAGATCGCC
GCGCTCGTCG CGCAGCAGGA GCAGTGGCGC GCGCAGGCGG ACAAGGCGCA GGGCGATCTC
GAAGTGGCCG AAGAGGCGCG CGCGGTCGCC GACGAAAAGG CGGCGATCGC CGAGGACGAC
GCGGCCGCGA AGCACGACGC GCTGCCCGCG CTCGAGGCGC GCTGGCGCGA TGCGCAGACG
GGCCTGAACG ACGAGCGCGG CCGGATCGCG CAGACCGAAC AGGCGCTGAA GCTCGAAGCC
GCGCACCAGC GCAACGCCGA TCAGCAATTG CAGCAGTTGC AGCAGCGCCA CGAGCGCCTG
AAGGTCGAGG CGGGCGGCCT CGACGCGCCG GACGAGGCGC AGCTCGAGGA ACTGCGGATG
CAGCTCGCCG AGCACGAGGC GATGCTGGCC GAGGCGCAGG CGCGCCTCGC CGACGCGCAG
GAAGCGCTGC CGCGCCTCGA CGCGCAGCGC CGCGCGGCGC ACGAGCGCGT GCAGGCCGAG
AGCGCGCAGA TCCATCAGCT CGAAGCGCGT CTCGCCGCGC TCAAGCAGTT GCAGGAAAAC
GTGCAGACGC AGGGCAAGAT CCAGCCGTGG CTCGACAAGC ACGAGCTCGG CGCGCTGCCG
CGTCTGTGGA AGAAGCTGCA CGTCGAGGCC GGCTGGGAAA CCGCGCTCGA AGCGGTGCTG
CGCGAGCGGC TCGCCGCGCT CGAAGTGTCG AATCTCGACT GGGTGAAGGC GTTCGCCACC
GACGCGCCGC CCGCGAAGCT CGCGTTCTAC GCGCCGCCCG CCGCGGGCGA GCCGCTCGCC
GCGCCGGGCG CGTTGCGCCC GCTCCTGCCG CTCGTGCGCA TCGACGACGC GGGCTTGCGC
GCGGTGCTCA ACGATTGGCT CGGCACGGTG TTCGTCGCCG ACGACCTCGC GCAGGCGCTC
GCCGCGCGCA TGCAATTGCC GCAGGGCGGC GCGTTCGTCG TGAAGGCGGG CCACGTCGTC
ACGCGCTCGG GCGTGCAGCT CTATGCGGCC GACTCCGAGC AGGCGGGCAT GCTCGCGCGC
GCGCAGGAAA TCGAGAACCT GACGCGCCAG GTGCGCGCGC AGGCGCTCCT GTCCGACGAG
GCGAAGGCGG CGGCGATCCG CGCGGAAGCC GCGCACACGC AGGCGTCGCA GGCGCTGACC
GAAGTGCGCG CGCAGGCCGA GCGTGCGACG CAGCGCGTGC ACGCGCTGCA GATGGACGTG
CTCAAGCTCA CGCAGGCGCA CGAGCGCTAT ACGCAGCGCA GTACGCAGAT CCGCGAGGAA
CTCGAGGAGA TCGGCGCGCA GATCGAGGAG CAGCGTGCGC TGCGCGCGGA GTCGGAGGCG
AATTTCGAGC GCCACGACGC CGAGCTCGCC GAATTGCAGG CGCGCTTCGA GGACAATCAG
CTCGCGTTCG AATCGCTCGA CGAGACGCTG ACGAACGCGC GCCAGGAGGC GCGCGAGCGC
GAGCGCGCGG CCACCGACGC GCGCTTCGCC GCGCGCCAGT CCGCGAACCG CATCGACGAG
CTGAAGCGCT CGATCCAGGT CGCGCACGAG CAGGCCGAGC GCGTCGCGGC GTCGCTCGAG
GATGCGCGCG CGGAGCTCGA GACGATCAAC GAGCAGACCG CGCACACCGG CCTGCAGGAC
GCGCTCGAAG TGCGCGCGGC GAAGGAGCAG GCGCTCGGCG CCGCGCGCGC GGAGCTCGAC
GATCTCACGG CGAAGCTGCG CGCGGCCGAC GAGGCGCGGC TCGCCGCCGA GCGCTCGCTG
CAGCCGCTGC GCGATCGCAT CACCGAGCTG CAACTGAAGG AGCAGGCGGC GCGTATGACG
GGCGAGCAGT TCGCCGAGCA GCTCGCGACG GCCGAGGTCG ACGAGGCCGC GCTGAAGGAA
AAGCTCATGC CGGACATGAA GCCGTCGTAC CTGCAGGGCG AGGTCACGCG GATCAACAAC
GCGATCAACG CGCTCGGCCC GGTCAACATG GCGGCGCTCG ACGAGCTCGC GGCCGCGAGC
GAGCGCAAGG TGTTCCTCGA TGCGCAATCG GCCGATCTGA CGAACGCGAT CGAGACGCTC
GAGGACGCGA TCCGCAAGAT CGACCAGGAA ACGCGCGCGC TCCTGCAGGC GACCTTCGAC
GAAGTGAACC GCCATTTCAG CGATCTGTTC CCGCGCCTGT TCGGCGGCGG GCAGGCGAAG
CTCATCATGA CGGGCGACGA GATTCTCGAC GCCGGCGTGC AGGTGATGGC GCAGCCGCCC
GGCAAGAAGA ACGCGACGAT TCACCTGCTG TCGGGCGGCG AGAAGGCGCT GACGGCGACC
GCGCTCGTGT TCGCGATGTT CCAGCTGAAT CCGGCGCCGT TCTGCCTGCT CGACGAGGTC
GACGCGCCGC TCGACGACGC GAACACCGAG CGCTTCGCGA ATCTCGTGCG CGCGATGTCC
GACAAGACGC AGTTCCTTTT CATCTCGCAC AACAAGATCG CGATGGAGAT GGCGCAGCAA
CTGATCGGCG TGACGATGCA GGAGCAGGGC GTATCGCGGA TCGTCGCGGT CGACATGGAA
ACGGCCGCGG GTTTTGCCCA GAATTGA
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| Protein sequence | MPTKCRARAN GRAACASSSR PCCRAACIAP ARPKTNRASR GTARARWYDW PHSRGRLLDS
TAPFFESWAC GARAGLPAES RRATQVPNRF TLFTTDTAVR LSSIKLAGFK SFVDPTHFQV
PGQLVGVVGP NGCGKSNIID AVRWVLGESR ASELRGESMQ DVIFNGSTTR KPGSRASVEL
IFDNSDGRAA GQWGQYGEIA VKRVLTRDGT SSYYINNLPA RRRDIQDIFL GTGLGPRAYA
IIGQGMIARI IEAKPEELRV FLEEAAGVSK YKERRRETEN RLHDTRENLT RVEDIVRELG
ANLEKLEAQA VVATKYKELV ADGEEKQRLL WLLRKNEAAA EQDRQRRAIG DAQIELDAQT
AKLREVEAQL ETLRVAHYSA SDAMQGAQGA LYEANAEVSR LEAQIKFIVE SRNRVQAQIA
ALVAQQEQWR AQADKAQGDL EVAEEARAVA DEKAAIAEDD AAAKHDALPA LEARWRDAQT
GLNDERGRIA QTEQALKLEA AHQRNADQQL QQLQQRHERL KVEAGGLDAP DEAQLEELRM
QLAEHEAMLA EAQARLADAQ EALPRLDAQR RAAHERVQAE SAQIHQLEAR LAALKQLQEN
VQTQGKIQPW LDKHELGALP RLWKKLHVEA GWETALEAVL RERLAALEVS NLDWVKAFAT
DAPPAKLAFY APPAAGEPLA APGALRPLLP LVRIDDAGLR AVLNDWLGTV FVADDLAQAL
AARMQLPQGG AFVVKAGHVV TRSGVQLYAA DSEQAGMLAR AQEIENLTRQ VRAQALLSDE
AKAAAIRAEA AHTQASQALT EVRAQAERAT QRVHALQMDV LKLTQAHERY TQRSTQIREE
LEEIGAQIEE QRALRAESEA NFERHDAELA ELQARFEDNQ LAFESLDETL TNARQEARER
ERAATDARFA ARQSANRIDE LKRSIQVAHE QAERVAASLE DARAELETIN EQTAHTGLQD
ALEVRAAKEQ ALGAARAELD DLTAKLRAAD EARLAAERSL QPLRDRITEL QLKEQAARMT
GEQFAEQLAT AEVDEAALKE KLMPDMKPSY LQGEVTRINN AINALGPVNM AALDELAAAS
ERKVFLDAQS ADLTNAIETL EDAIRKIDQE TRALLQATFD EVNRHFSDLF PRLFGGGQAK
LIMTGDEILD AGVQVMAQPP GKKNATIHLL SGGEKALTAT ALVFAMFQLN PAPFCLLDEV
DAPLDDANTE RFANLVRAMS DKTQFLFISH NKIAMEMAQQ LIGVTMQEQG VSRIVAVDME
TAAGFAQN
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