Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2518 |
Symbol | mrcA |
ID | 3688896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 2787648 |
End bp | 2790170 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637728974 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_333910 |
Protein GI | 76810326 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.316382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATTA TCAAACGACC GCCTTCCTCC CGCGCCACGA ACGAGCACCA TTATTCGCTG CGACGCTCGC CGGCCGGCGC CTATTACACC GATGACGACG ATGATGACGA GCGCGCGCCG CGCCGCACGG GCCGCGACGG CGGCTCGCGC ACGTTCGGCT CGCGCGTCGC GCTGTGGTTC GCCGGGCTCT TCGCGACGCT GCTCGTCGTC GGCGCGCTGA TCGTAGGCTA TGCGCTGGTG GTGATGGGGC CGCAACTGCC GTCGCTCGAC GCGCTCACGA ATTACCAGCC GAAGGTGCCG CTGCGCGTGT ACAGCGCGGA CCACGTGCTG CTCGGCGAAT TCGGCGAGGA GCGCCGCAGC CTCGTGCGCT TCGCGGACAT CCCCGACGTG ATGAAGAAGG CGGTGCTCGC GATCGAGGAT TATCGCTTCT ACGAGCACGG CGGCGTGGAT TTCGTCGGCA TCCTGCGCGC GGGTGTGGCC GATCTGCTGC ATGGCGGCGC GCGGCAGGGC GCGAGCACGA TCACGATGCA GGTCGCGCGC AACTTCTTCC TGTCGAGCGA GAAGACGTAC ACGCGCAAGA TCTACGAGAT GCTGCTCGCG TACAAGATCG AAAAGGCGCT GACGAAGGAC CAGATCCTCG AGCTGTACAT GAACCAGATC TATCTGGGCC AGCGCGCGTA CGGCTTCGCG GCCGCCGCGC GCGTGTATTT CGGCAAGGAC CTGAAGGACG TCACGCTCGC CGAGGCCGCG ATGCTCGCGG GGCTGCCGAA GGCGCCGTCC GCGTACAACC CGGTCGTCAA CCCGAAGCGC GCGAAGGTGC GTCAGGAGTA CATCCTGAAG CGGATGCTGG AGATCGGCTA CATCACGCAG CAGCAGTACG ATCAGGCGGT GAAGGAGGAA ATCCACGTGC GCACGCCGGG TAACCAGTAC GCGGTGCACG GCGAGTACGT CGCCGAAATG GTGCGGCAGA TGATGTATGC GCAGTACAAG GACGAAACCT ACACGCGCGG CCTGACCGTC ACGACGACGA TCAACGCGGC CGACCAGGAA GCCGCGTACC AGGCGGTGCG CCGCGGGATC ATGGATTACG AGCGCCGCCA CGGCTATCGC GGGCCGGAAG GCTTCGTCGC GCTGCCGCCC GCCGGCGACG AGCGCGACGA GGCGATCGAC GACGCGCTCG CGGATCATCC CGACAACGGC GATCTGCAGT CGGCCGTCGT GCTCGCCGTC TCGCCGACGG CGGTCGACGT GCAGTTCGTC GGCGGCGCGA CGGCGACGAT CAACGGCGCC GGGCTGCGTT TCGCGGCCGG TGCGTTGAGC GCGCGCGCGT CGGCCGCGCT GAAGATCAAG CCGGGTTCGA TCGTGCGCGT GATGAAGGAC GCGAGGAGCG CATGGCAGAT CGTGCAGTTG CCGCAGGTCG AGGGCGCGCT CGTCGCGGTC GCGCCGCAGG ACGGCGCGAT CCGCTCGCTC GTCGGCGGCT TCGATTTCAA CAAGAGCAAG TTCAACCACG TGACGCAGGC ATGGCGGCAG CCGGGCTCGT CGTTCAAGCC GTTCATCTAT TCGGCGTCGC TCGAAAAGGG CCTCGGGCCC GCGACGATCA TCAACGACGC GCCGCTCTAT TTCCCGCCGA GCGTGCCGGG CGGCCAGCCG TGGGAGCCGA AGGACGACGA TCAGCCGGAC GGCCCGATGC CGATGCGCAC CGCGCTGCAG CGCTCGAAGA ACCTCGTGTC GATCCGGATT CTGGCGTCGA TCGGCACGTC GTATGCGCAG GACTACGTGA CGCAGCGCTT CGGCTTCGAT CCCGCGAAGA CGCCGCCGTA TCTGCCGATG GCGCTCGGCG CGGGCCTCGT CACGCCGCTG CAGCTCGCGG CGGGCTACGC GGTGTTCGCC AACGGCGGCT TCAAGGTCGA TCCGTATCTG ATCGCCGAAG TCGACGACGC GCGCGGGCAG GCGCTGCAAA AGGCGCAGCC GGTGGTCGCG GGCGCGAGCG CGACGCGCAC GATCGACGCG CGCAACGCCT ACGTGATGAA CAGCCTGCTG CACACCGTCG CGACGGCGGG CACGGGCGCC GGCACGAACG CGCTCGGCCG TGGCGACCTG CAGGGCAAGA CCGGCACGAC GAACGAGGCG AAGGACGGCT GGTTCGCCGG CTATCAGCAG TCGCTCGTCG CCGTTGCATG GATGGGCTTC GATCAGCCGA AGAGTCTCGG CAGCCGTGAA TTCGGCGCGC AGCTCGCGTT GCCGATCTGG GTGAATTACA TGCGCACCGC GCTCAACGGC GTGCCGGAGC AGCAGATGGC GATGCCGGAC GGGCTGACGA CGATCGACGG CGAGCTGTAT TACGCGGATC GCACGCCGGG CGCGGGCTTC GTCGCGAGCG TCGATTTCAA TCCGGCCGCG AGCCCGACCG TGAGCGCGAA CGATGCGCTC GGCTCGGCGG GCGCGGCGGG CCTGACGCCG CCGCCCGTGA CGCCGGAGGA GAAGCGGCAG ATCATCGACA TGTTCGAAGG CAACAAGCCT TGA
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Protein sequence | MPIIKRPPSS RATNEHHYSL RRSPAGAYYT DDDDDDERAP RRTGRDGGSR TFGSRVALWF AGLFATLLVV GALIVGYALV VMGPQLPSLD ALTNYQPKVP LRVYSADHVL LGEFGEERRS LVRFADIPDV MKKAVLAIED YRFYEHGGVD FVGILRAGVA DLLHGGARQG ASTITMQVAR NFFLSSEKTY TRKIYEMLLA YKIEKALTKD QILELYMNQI YLGQRAYGFA AAARVYFGKD LKDVTLAEAA MLAGLPKAPS AYNPVVNPKR AKVRQEYILK RMLEIGYITQ QQYDQAVKEE IHVRTPGNQY AVHGEYVAEM VRQMMYAQYK DETYTRGLTV TTTINAADQE AAYQAVRRGI MDYERRHGYR GPEGFVALPP AGDERDEAID DALADHPDNG DLQSAVVLAV SPTAVDVQFV GGATATINGA GLRFAAGALS ARASAALKIK PGSIVRVMKD ARSAWQIVQL PQVEGALVAV APQDGAIRSL VGGFDFNKSK FNHVTQAWRQ PGSSFKPFIY SASLEKGLGP ATIINDAPLY FPPSVPGGQP WEPKDDDQPD GPMPMRTALQ RSKNLVSIRI LASIGTSYAQ DYVTQRFGFD PAKTPPYLPM ALGAGLVTPL QLAAGYAVFA NGGFKVDPYL IAEVDDARGQ ALQKAQPVVA GASATRTIDA RNAYVMNSLL HTVATAGTGA GTNALGRGDL QGKTGTTNEA KDGWFAGYQQ SLVAVAWMGF DQPKSLGSRE FGAQLALPIW VNYMRTALNG VPEQQMAMPD GLTTIDGELY YADRTPGAGF VASVDFNPAA SPTVSANDAL GSAGAAGLTP PPVTPEEKRQ IIDMFEGNKP
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