Gene BURPS1710b_2366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2366 
SymbolnlpD 
ID3689514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2640291 
End bp2641169 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content68% 
IMG OID637728822 
Productpeptidase 
Protein accessionYP_333761 
Protein GI76810726 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.417341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACA ATCGTTCGAA GGTTCCGCTC TCGCTCGCTC AGCGCGCGAT TTGCATGGCG 
GCGTTCGCGC TGCTCGGCGC GTGCGCGACG CGGCTCGATC AGGCGCCCGT CGTCGACCGC
TCCGGCTCGC TCGGCACGAC GGCCGCCACG CAGCCGCCCG CGCCGCTGCC GCCCGCGCCT
CCGGGTTACT ACCGGGTGAA GCCGGGCGAC ACGCTTTATC GGATCGCGCT CGAGAACGGC
CAGAACTATC GCGACATCGC CGCGTGGAAC AACCTGACCA ACCCGAATCA GATCGAAGTC
GATCAGTTGC TGCGCGTGTC GCCGACCGCG GGCGGCGCGA CGGCGGCCGC GCCTGCCGCG
GGCGCGGTGG TCACGCCGCC GCTGTCGAGC GGCCCGTCGA ACGGCGCCGC CGCGGTGCCG
CCGATCTATG GCTCCGGTTC CACCGCGAGC GCCGCGCCGA GCGCGCCGGC CGCATCCGCG
TCGAGCGAGC CGAGCGCGCC CGCCGCGAAC GGCAACGTGT CGTTCGCGTG GCCGGTGCGC
GGCGCGCTGC TGAACACGTT CGACGATTCG AAGAACAAGG GGATCAACAT CGGCGGCCCC
GCCGGCGAGG CCGTGAAGGC CGCCGCGGAT GGTCGCGTGG TGTACGCGGG CAACGGGCTG
CGCGGCTACG GCAACCTCAT TATCATCAAG CACGACGCAA CTTATCTCAC GGCGTATGCA
CACAATCGCG CTTTGATGGT AAAAGAGGGG GACGCGGTGA CGAAAGGCCA GAAGATCGCA
GAGATGGGCA ATAGTGATTC CGACCGCGTG ATGCTGCATT TCGAGGTTCG CCGGCAGGGT
AAACCTGTCG ATCCGCTGAA GTATTTGCCG CCTCAATAA
 
Protein sequence
MQNNRSKVPL SLAQRAICMA AFALLGACAT RLDQAPVVDR SGSLGTTAAT QPPAPLPPAP 
PGYYRVKPGD TLYRIALENG QNYRDIAAWN NLTNPNQIEV DQLLRVSPTA GGATAAAPAA
GAVVTPPLSS GPSNGAAAVP PIYGSGSTAS AAPSAPAASA SSEPSAPAAN GNVSFAWPVR
GALLNTFDDS KNKGINIGGP AGEAVKAAAD GRVVYAGNGL RGYGNLIIIK HDATYLTAYA
HNRALMVKEG DAVTKGQKIA EMGNSDSDRV MLHFEVRRQG KPVDPLKYLP PQ