Gene BURPS1710b_2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2329 
SymbolphbB-1 
ID3689248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2601194 
End bp2601940 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content63% 
IMG OID637728785 
Productacetyacetyl-CoA reductase 
Protein accessionYP_333724 
Protein GI76811242 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0663628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTATGT CTCAGCGAAT TGCTTACGTA ACGGGCGGCA TGGGCGGCAT CGGCACGAGC 
ATCTGCCAGC GCCTGCACAA GGACGGCTTC AGGGTGGTCG CGGGCTGCGG CCCGAATTCG
CCGCGCCGCG TGAAATGGCT CGAGGATCAG AAGGCGCTCG GCTTCGATTT CTACGCGTCC
GAAGGCAACG TCGGCGACTG GGATTCGACG AAGCAGGCGT TCGACAAGGT GAAGGCCGAA
GTGGGCGAGA TCGACGTGCT CGTCAATAAC GCGGGCATCA CGCGCGACGT CGTGTTCCGC
AAGATGACCC GCGAGGATTG GCAGGCGGTG ATCGACACGA ACCTGACGAG CCTCTTCAAC
GTCACGAAGC AGGTGATCGA CGGGATGGTC GAGCGCGGCT GGGGGCGCAT CATCAACATC
TCGTCGGTGA ACGGCCAGAA GGGGCAGTTC GGCCAGACCA ACTATTCGAC CGCGAAGGCG
GGCATTCACG GCTTCACGAT GTCGCTCGCG CAGGAAGTCG CGACGAAGGG GGTGACGGTC
AACACGGTGT CGCCGGGCTA CATCGGCACG GACATGGTGA AGGCGATTCG GCCGGACGTG
CTCGAGAAGA TCGTCGCGAC GATTCCGGTG CGCCGTCTCG GCTCGCCCGA CGAGATCGGC
TCGATCGTCG CGTGGCTCGC GTCGGAAGAG TCCGGGTTCT CGACGGGCGC CGATTTTTCG
CTGAACGGCG GCTTGCATAT GGGCTGA
 
Protein sequence
MVMSQRIAYV TGGMGGIGTS ICQRLHKDGF RVVAGCGPNS PRRVKWLEDQ KALGFDFYAS 
EGNVGDWDST KQAFDKVKAE VGEIDVLVNN AGITRDVVFR KMTREDWQAV IDTNLTSLFN
VTKQVIDGMV ERGWGRIINI SSVNGQKGQF GQTNYSTAKA GIHGFTMSLA QEVATKGVTV
NTVSPGYIGT DMVKAIRPDV LEKIVATIPV RRLGSPDEIG SIVAWLASEE SGFSTGADFS
LNGGLHMG