Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2172 |
Symbol | |
ID | 3690380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 2408634 |
End bp | 2409278 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637728628 |
Product | recombinase |
Protein accession | YP_333567 |
Protein GI | 76812136 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0678128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAATGCT CAGTCAAGCC TGAGGTCACG ATGCGTATCG GCTATGCGCG CGTATCGACC GAGGAACAAT GCCTTGCGCT GCAAGAGGAT GCTTTGACTC GAGCAGGATG TGACTTGATT TTCAGCGACC ACGGCATTTC GGGCACCAAT TTCTGCCGAC CTGGCCTCGA TCAAGCCCTC CAACACCTTG GACGAGGCGA TACTTTGGTC GTTTGGCGTC TCGATCGACT CGGACGTTCG CTGACCAAAC TCGTCGACAT GATCGATTTA TTGGGCCAAC GCGATATCCA TTTTGAATCG CTAACAGAAT CGATCAATAC ACAATCACCG AGTGGCACGC TGATTTTTCA TATCATTGCT GCGCTCGCAC AGTTCGAGCG TGCGTTGATC AGCGAGCGGA CGCGTGCGGG TCTCGCGGCA GCAAAGAACC GTGGTGTACG TGTGGGGCGG CCAAGGTCGC TCACCGAATA TCAAGCAAGT CAGGCAATTC GCCTATTGTC GGAACGCTCG ATCGCCGCAG TTGCGAAGGA ATTTGGTGTG CATCCGCAGA CACTTAGGCG ATTGTGGGCA ATCCATAAGC GGCACACAGA ATCCGCAGGT GAATTTAACG AATCGAGTAC ATCACCGTGC GTCAAAGACG AATGA
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Protein sequence | MQCSVKPEVT MRIGYARVST EEQCLALQED ALTRAGCDLI FSDHGISGTN FCRPGLDQAL QHLGRGDTLV VWRLDRLGRS LTKLVDMIDL LGQRDIHFES LTESINTQSP SGTLIFHIIA ALAQFERALI SERTRAGLAA AKNRGVRVGR PRSLTEYQAS QAIRLLSERS IAAVAKEFGV HPQTLRRLWA IHKRHTESAG EFNESSTSPC VKDE
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