Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_2091 |
Symbol | orbA |
ID | 3691840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 2277244 |
End bp | 2279457 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637728547 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_333486 |
Protein GI | 76810798 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.552144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTGGG CAACCAGCAC GCGCGTGCGT GCGATCGCGG CCGGCGTGGC GTTCTACGCG GCGGCGGCGG GTCATGCGCA GGCACAGGCG GCGCAGCCGG GGGCGGACGC GCGGCAGCCG GGCGGCGAGG CGAAGGCAGA CACCGCGGCG GGCGGCACGT TGCCCGCGAT CTCGGTGTCG GGAGTGGCGG AGCGCGACGC GAGCGTCGGC CTCGTCGCGC GGCGCAGCAT GACGGGCACG AAAACGGATA CGCCGATCAT CGAGATTCCA CAGACGATCA ACGTCGTCAC CGCGCAGCAG ATCGAGGCGA CGGGCGCGAC CGACATCAAT CAGGCGTTCC GCTACATTCC GGGCTTCTCG AGCTACGGGT CGGACAACCG TTCGGACTGG TACGCGGCGC TGCGCGGCTT CACGCCGACC GTGTTCGTCG ACGGGCTGCA GGTGCCGAAC ACGATCAACC TGTCGAGCTG GCGCGTCGAT CCGTACATGA TCGACAGCAT CGCCGTGCTG CGCGGCCCGA CGTCGGTGCT GTACGGGCAG GGCGATCCCG GCGCGATCGT CGACGTGCAG AGCAAGCTCG CGAACGGCGA GCGCATCCGC GAGCTCGGCG TGCAGGTCGG CAACTACGCG CGCAAGCAGC TGATGTTCGA CATCGGCGAC ACGATCGGCA AGGACGGCAC GCTGTCGTAC CGGATCGTCG GCGTCGGCCG CGACGGCAAC GCGCAGACGG GGCCGCTCGC CGACCAGCGC GTGTCGTTCG CGCCGTCGCT CAAATGGCAG CCGAACGCGG ACACGTCGCT CACCCTCGCC GCGACGTACC TGCAGGACTG GGGCGACACG TCGAGCAACT TCCTGCCGTC GCGCGGCACC GTGCTGCCGA ATCCGAACGG CACGATCTCG GACGACCTGT ACACGGCCGA TGCGAACTTC GACCATTACC GCAAGAAGCA GTGGTCGCTC GGCTATCAGT TCGAGCACAA GCTGAACCCG GTGTGGACGC TGCGGCAGAA CGTGCGCTGG ATGCACCTGT CGCTCGACGA CGCGTCCGTC TACGGCGGCG GCCTCGACGA CGCAGACCCG ACGATGGCGA CGATGACGCG CTACGCGGGC CTGTTCCAGT TCAACTACAG CCGCTTCGAC GTCGACAACC AGGCGCAGGC GAAATTCACG ACGGGCCCGC TTTCGCACAC GCTGCTGTTC GGCTTCGACT ACAACCGCCA GACGACGACC GATAGCGAAT GGCTCGCGAA GGGGCCGAGC CTGAACCTGT ACCGGCCCGT CTACACGCCG ATTCCGTCCG ACATCTTCAG CGGGCCGAAC GCGTACCCGC GCACCGACAC GAAGACGACG CTGAACGCAT TCGGCCTGTA CGTGCAGGAC CAGATCAAGT GGCGGCGCTG GGTGCTCACG CTCGGCGGCC GGCAGGACTG GACGCGCACG TCGCAGGACG ACATCGCGAA CGCGGCGAGC TTCAGGCAGA ACGACCACGC GTTCAGCGGG CGCGTGGGCC TCACGTATCT CGGCGACTAC GGGCTCGCGC CGTACCTCAG CTATTCGACG TCGTTCAATC CGCAGATCGG CCTGAAGCTC GCGGGCGGCG GGCTCGCGAC GCCGACCAAG GGCCGCCAGA TCGAGGCTGG CCTGCGCTGG CAGCCGCCCG GCAAGAACCT GATGCTGAAC GCGGCCGTCT ACCAGATCAA CCAGACGAAC GTCGCGATGA GCAATCCGAA CGACCCGACG AGCAGCACGT TCGTGCAGGT GGGCGAGGTG CGCTCGCGCG GCGTCGAGCT GAGCGCGGTG GGCAACCTGT CGCGCGAGCT GTCGGTGATC GCCGCGTACG TCTATCAGGA CGTGAAGAAC GTGCGGGCGA ACGACAACAC GCTGAACAAG TGGCCCGTCG ACGTGCCGCG GCCGCGCCAG ATCGCGTCGC TGTGGGCCGA CTGGACGTGG CGCACCGGGC CGCTCACGGG CTTCGGCGTC GGCGCGGGCG TGCGCTACAT GAGCGCGGCG GCGGGCGCGG CCGACAATTC GCTCACGGTG CCGAGCTACA CGCTGTTCGA CGCGGCGCTG CACTACGAGC TGCGCAACTG GCGTTTCGCG CTCAACGCGA CGAACCTGTT CAACCGCCGC TACGTGGCCG GCTGCCAGTC GGATGCGGTG TGCATGTACG GCAACCAGCG CACCGTGATC GCGACCGCGA AATACAACTG GTAA
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Protein sequence | MEWATSTRVR AIAAGVAFYA AAAGHAQAQA AQPGADARQP GGEAKADTAA GGTLPAISVS GVAERDASVG LVARRSMTGT KTDTPIIEIP QTINVVTAQQ IEATGATDIN QAFRYIPGFS SYGSDNRSDW YAALRGFTPT VFVDGLQVPN TINLSSWRVD PYMIDSIAVL RGPTSVLYGQ GDPGAIVDVQ SKLANGERIR ELGVQVGNYA RKQLMFDIGD TIGKDGTLSY RIVGVGRDGN AQTGPLADQR VSFAPSLKWQ PNADTSLTLA ATYLQDWGDT SSNFLPSRGT VLPNPNGTIS DDLYTADANF DHYRKKQWSL GYQFEHKLNP VWTLRQNVRW MHLSLDDASV YGGGLDDADP TMATMTRYAG LFQFNYSRFD VDNQAQAKFT TGPLSHTLLF GFDYNRQTTT DSEWLAKGPS LNLYRPVYTP IPSDIFSGPN AYPRTDTKTT LNAFGLYVQD QIKWRRWVLT LGGRQDWTRT SQDDIANAAS FRQNDHAFSG RVGLTYLGDY GLAPYLSYST SFNPQIGLKL AGGGLATPTK GRQIEAGLRW QPPGKNLMLN AAVYQINQTN VAMSNPNDPT SSTFVQVGEV RSRGVELSAV GNLSRELSVI AAYVYQDVKN VRANDNTLNK WPVDVPRPRQ IASLWADWTW RTGPLTGFGV GAGVRYMSAA AGAADNSLTV PSYTLFDAAL HYELRNWRFA LNATNLFNRR YVAGCQSDAV CMYGNQRTVI ATAKYNW
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